RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 GNL3LQ9NVN8 582 aaKnown RBP15.13■□□□□ 0.01
SSR4-210ENST00000485612 RBPJLQ9UBG7 517 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 RFX7Q2KHR2 1363 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 MSCO60682 206 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 ERVK-9P63128 1117 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 ERVK-24P63145 666 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 ALDH1L2Q3SY69 923 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 SLC39A5Q6ZMH5 540 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 EDC3Q96F86 508 aaKnown RBP15.12■□□□□ 0.01
SSR4-210ENST00000485612 RNPC3Q96LT9 517 aaKnown RBP15.12■□□□□ 0.01
SSR4-210ENST00000485612 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
SSR4-210ENST00000485612 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
SSR4-210ENST00000485612 LTBP2Q14767 1821 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 GAKO14976 1311 aa15.12■□□□□ 0.01
SSR4-210ENST00000485612 LOC285556D6RIA3 1793 aa15.11■□□□□ 0.01
SSR4-210ENST00000485612 CAP2P40123 477 aa15.11■□□□□ 0.01
SSR4-210ENST00000485612 GJC2Q5T442 439 aaPredicted RBP15.11■□□□□ 0.01
SSR4-210ENST00000485612 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
SSR4-210ENST00000485612 UHRF1Q96T88 793 aaPredicted RBP15.11■□□□□ 0.01
SSR4-210ENST00000485612 DENND2AQ9ULE3 1009 aa15.11■□□□□ 0.01
SSR4-210ENST00000485612 TRIM43BA6NCK2 446 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 UBTFL1P0CB47 393 aaPredicted RBP15.1■□□□□ 0.01
SSR4-210ENST00000485612 BTDP43251 543 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 PHKA1P46020 1223 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 BACE1P56817 501 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 MAP2K5Q13163 448 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 MTMR2Q13614 643 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
SSR4-210ENST00000485612 ATP2B3Q16720 1220 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 TRIM60Q495X7 471 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 SH3RF1Q7Z6J0 888 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 DZIP1Q86YF9 867 aaKnown RBP15.1■□□□□ 0.01
SSR4-210ENST00000485612 SLF2Q8IX21 1173 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
SSR4-210ENST00000485612 ARRDC4Q8NCT1 418 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 TRIM43Q96BQ3 446 aaPredicted RBP15.1■□□□□ 0.01
SSR4-210ENST00000485612 PAGR1Q9BTK6 254 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 ZNF576Q9H609 170 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 PDLIM7Q9NR12 457 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 FLRT1Q9NZU1 646 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 SIPA1L1O43166 1804 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 FOCADQ5VW36 1801 aa15.1■□□□□ 0.01
SSR4-210ENST00000485612 ADORA1P30542 326 aa15.09■□□□□ 0.01
SSR4-210ENST00000485612 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
SSR4-210ENST00000485612 FAM163AQ96GL9 167 aaPredicted RBP15.09■□□□□ 0.01
SSR4-210ENST00000485612 WDR18Q9BV38 432 aa15.09■□□□□ 0.01
SSR4-210ENST00000485612 C1QTNF1Q9BXJ1 281 aa15.09■□□□□ 0.01
SSR4-210ENST00000485612 NOB1Q9ULX3 412 aaKnown RBP15.09■□□□□ 0.01
SSR4-210ENST00000485612 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.08■□□□□ 0
SSR4-210ENST00000485612 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.08■□□□□ 0
SSR4-210ENST00000485612 KBTBD13C9JR72 458 aa15.08■□□□□ 0
SSR4-210ENST00000485612 SEMA3EO15041 775 aa15.08■□□□□ 0
SSR4-210ENST00000485612 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0
SSR4-210ENST00000485612 DNAJB2P25686 324 aa15.08■□□□□ 0
SSR4-210ENST00000485612 ATP2B2Q01814 1243 aa15.08■□□□□ 0
SSR4-210ENST00000485612 IL27Q8NEV9 243 aa15.08■□□□□ 0
SSR4-210ENST00000485612 GTF3C2Q8WUA4 911 aaPredicted RBP15.08■□□□□ 0
SSR4-210ENST00000485612 GAS2L1Q99501 681 aaPredicted RBP15.08■□□□□ 0
SSR4-210ENST00000485612 MEIS3Q99687 375 aa15.08■□□□□ 0
SSR4-210ENST00000485612 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
SSR4-210ENST00000485612 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
SSR4-210ENST00000485612 C19orf81C9J6K1 198 aa15.07■□□□□ 0
SSR4-210ENST00000485612 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
SSR4-210ENST00000485612 CIAO1O76071 339 aa15.07■□□□□ 0
SSR4-210ENST00000485612 EPHB4P54760 987 aa15.07■□□□□ 0
SSR4-210ENST00000485612 SNX17Q15036 470 aa15.07■□□□□ 0
SSR4-210ENST00000485612 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
SSR4-210ENST00000485612 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
SSR4-210ENST00000485612 ABCF2Q9UG63 623 aa15.07■□□□□ 0
SSR4-210ENST00000485612 ARIH1Q9Y4X5 557 aaPredicted RBP15.07■□□□□ 0
SSR4-210ENST00000485612 FRMPD3Q5JV73 1810 aa15.06■□□□□ 0
SSR4-210ENST00000485612 ITGB8P26012 769 aa15.06■□□□□ 0
SSR4-210ENST00000485612 CYP2C19P33261 490 aa15.06■□□□□ 0
SSR4-210ENST00000485612 RHBDL3P58872 404 aa15.06■□□□□ 0
SSR4-210ENST00000485612 WDR78Q5VTH9 848 aa15.06■□□□□ 0
SSR4-210ENST00000485612 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
SSR4-210ENST00000485612 TRPV1Q8NER1 839 aa15.06■□□□□ 0
SSR4-210ENST00000485612 TIFAQ96CG3 184 aa15.06■□□□□ 0
SSR4-210ENST00000485612 TACC3Q9Y6A5 838 aa15.06■□□□□ 0
SSR4-210ENST00000485612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.06■□□□□ 0
SSR4-210ENST00000485612 GPR75-ASB3A0A0A6YYF3 556 aa15.05■□□□□ -0
SSR4-210ENST00000485612 SLC15A5A6NIM6 579 aa15.05■□□□□ -0
SSR4-210ENST00000485612 USP17L10C9JJH3 530 aa15.05■□□□□ -0
SSR4-210ENST00000485612 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
SSR4-210ENST00000485612 PTPREP23469 700 aa15.05■□□□□ -0
SSR4-210ENST00000485612 ADCYAP1R1P41586 468 aa15.05■□□□□ -0
SSR4-210ENST00000485612 CCNA1P78396 465 aa15.05■□□□□ -0
SSR4-210ENST00000485612 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ -0
SSR4-210ENST00000485612 HERC5Q9UII4 1024 aaKnown RBP15.05■□□□□ -0
SSR4-210ENST00000485612 FBXO3Q9UK99 471 aa15.05■□□□□ -0
SSR4-210ENST00000485612 TNNQ9UQP3 1299 aa15.05■□□□□ -0
SSR4-210ENST00000485612 HCN4Q9Y3Q4 1203 aa15.05■□□□□ -0
SSR4-210ENST00000485612 MROH7-TTC4A0A0A0MT08 1334 aa15.05■□□□□ -0
SSR4-210ENST00000485612 ASNSP08243 561 aa15.04■□□□□ -0
SSR4-210ENST00000485612 HOXC6P09630 235 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms