RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 STK11IPQ8N1F8 1099 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 CCDC17Q96LX7 622 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 NBPF3Q9H094 633 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 PICK1Q9NRD5 415 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.66■■□□□ 1.38
COL6A2-208ENST00000485591 RBM8AQ9Y5S9 174 aaKnown RBP23.66■■□□□ 1.38
COL6A2-208ENST00000485591 PTPRFP10586 1907 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 ASNSP08243 561 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 FGRP09769 529 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 PCP11498 1178 aaKnown RBP23.65■■□□□ 1.38
COL6A2-208ENST00000485591 RASA1P20936 1047 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 ABCB5Q2M3G0 1257 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 ERO1BQ86YB8 467 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 TBC1D10CQ8IV04 446 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 CCDC102AQ96A19 550 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 MKNK2Q9HBH9 465 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 ZBTB21Q9ULJ3 1066 aa23.65■■□□□ 1.38
COL6A2-208ENST00000485591 FAM155AB1AL88 458 aaPredicted RBP23.64■■□□□ 1.37
COL6A2-208ENST00000485591 ECE1P42892 770 aa23.64■■□□□ 1.37
COL6A2-208ENST00000485591 JAG1P78504 1218 aa23.64■■□□□ 1.37
COL6A2-208ENST00000485591 PAXIP1Q6ZW49 1069 aaPredicted RBP23.64■■□□□ 1.37
COL6A2-208ENST00000485591 STAG1Q8WVM7 1258 aa23.64■■□□□ 1.37
COL6A2-208ENST00000485591 OPTNQ96CV9 577 aa23.64■■□□□ 1.37
COL6A2-208ENST00000485591 WNK4Q96J92 1243 aa23.64■■□□□ 1.37
COL6A2-208ENST00000485591 ORC4O43929 436 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 PRDM1O75626 825 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 GH2P01242 217 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 ZBTB48P10074 688 aaPredicted RBP23.63■■□□□ 1.37
COL6A2-208ENST00000485591 PTPRAP18433 802 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 SHROOM1Q2M3G4 852 aaPredicted RBP23.63■■□□□ 1.37
COL6A2-208ENST00000485591 AKNAD1Q5T1N1 836 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 CYP4F22Q6NT55 531 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 CAPNS2Q96L46 248 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 RNF41Q9H4P4 317 aaPredicted RBP23.63■■□□□ 1.37
COL6A2-208ENST00000485591 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.63■■□□□ 1.37
COL6A2-208ENST00000485591 TACC3Q9Y6A5 838 aa23.63■■□□□ 1.37
COL6A2-208ENST00000485591 EPB41L2O43491 1005 aaKnown RBP23.62■■□□□ 1.37
COL6A2-208ENST00000485591 CYP21A2P08686 494 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 AKR1B1P15121 316 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 PPATQ06203 517 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 NECTIN1Q15223 517 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 SPRYD7Q5W111 196 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 TMEM179Q6ZVK1 233 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 CNKSR2Q8WXI2 1034 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 OTUD5Q96G74 571 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 TBC1D2Q9BYX2 928 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 CABP5Q9NP86 173 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 PLIN4Q96Q06 1357 aa23.62■■□□□ 1.37
COL6A2-208ENST00000485591 PPIL2Q13356 520 aa23.61■■□□□ 1.37
COL6A2-208ENST00000485591 MFSD6Q6ZSS7 791 aa23.61■■□□□ 1.37
COL6A2-208ENST00000485591 ZNF444Q8N0Y2 327 aaPredicted RBP23.61■■□□□ 1.37
COL6A2-208ENST00000485591 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.61■■□□□ 1.37
COL6A2-208ENST00000485591 USP17L5A8MUK1 530 aa23.6■■□□□ 1.37
COL6A2-208ENST00000485591 MPHOSPH10O00566 681 aaKnown RBP23.6■■□□□ 1.37
COL6A2-208ENST00000485591 EIF5BO60841 1220 aaKnown RBP23.6■■□□□ 1.37
COL6A2-208ENST00000485591 GJA5P36382 358 aa23.6■■□□□ 1.37
COL6A2-208ENST00000485591 NT5C2P49902 561 aa23.6■■□□□ 1.37
COL6A2-208ENST00000485591 C8orf34Q49A92 452 aa23.6■■□□□ 1.37
COL6A2-208ENST00000485591 INCENPQ9NQS7 918 aa23.6■■□□□ 1.37
COL6A2-208ENST00000485591 NEDD4P46934 1319 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
COL6A2-208ENST00000485591 GUCY1A2P33402 732 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 VEGFBP49765 207 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 NOGQ13253 232 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 AS3MTQ9HBK9 375 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 ZHX2Q9Y6X8 837 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 LOC285556D6RIA3 1793 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 MYH4Q9Y623 1939 aa23.59■■□□□ 1.37
COL6A2-208ENST00000485591 SLC27A2O14975 620 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 GRM1Q13255 1194 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 SEPT2Q15019 361 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 RAB3GAP1Q15042 981 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 RNF20Q5VTR2 975 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 CREB3L3Q68CJ9 461 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 CCDC84Q86UT8 332 aaPredicted RBP23.58■■□□□ 1.37
COL6A2-208ENST00000485591 TOMM22Q9NS69 142 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 AFG3L2Q9Y4W6 797 aa23.58■■□□□ 1.37
COL6A2-208ENST00000485591 IRF6O14896 467 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 TSPY3P0CV98 308 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 TSPY8P0CW00 308 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 RRP12Q5JTH9 1297 aaKnown RBP23.57■■□□□ 1.36
COL6A2-208ENST00000485591 NEDD1Q8NHV4 660 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 WDR18Q9BV38 432 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.57■■□□□ 1.36
COL6A2-208ENST00000485591 CNNM2Q9H8M5 875 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 KCNH4Q9UQ05 1017 aa23.57■■□□□ 1.36
COL6A2-208ENST00000485591 IGKV6D-41A0A0C4DH26 115 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 TSPY2A6NKD2 308 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 RANBP6O60518 1105 aaKnown RBP23.56■■□□□ 1.36
COL6A2-208ENST00000485591 TFAP4Q01664 338 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 MKRN3Q13064 507 aaKnown RBP23.56■■□□□ 1.36
COL6A2-208ENST00000485591 FAM47AQ5JRC9 791 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 DNAJC5GQ8N7S2 189 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 ZNF280CQ8ND82 737 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 ESR2Q92731 530 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 KRT23Q9C075 422 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 TAF6LQ9Y6J9 622 aa23.56■■□□□ 1.36
COL6A2-208ENST00000485591 E7EWF7 191 aa23.55■■□□□ 1.36
COL6A2-208ENST00000485591 CXCL11O14625 94 aa23.55■■□□□ 1.36
COL6A2-208ENST00000485591 HSPA4P34932 840 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms