RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	TREML4	Q6UXN2	200 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	ACAD11	Q709F0	780 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	6.01	□□□□□ -1.45
FN1-222	ENST00000485567	SVOP	Q8N4V2	548 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	ST13P5	Q8NFI4	369 aa	Predicted RBP	6.01	□□□□□ -1.45
FN1-222	ENST00000485567	MICAL1	Q8TDZ2	1067 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	SLC9A7	Q96T83	725 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	DNAJC7	Q99615	494 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	PICK1	Q9NRD5	415 aa		6.01	□□□□□ -1.45
FN1-222	ENST00000485567	LTBP3	Q9NS15	1303 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	TIAF1	O95411	115 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	HSP90B1	P14625	803 aa	Known RBP	6	□□□□□ -1.45
FN1-222	ENST00000485567	SNRPN	P63162	240 aa	Known RBP	6	□□□□□ -1.45
FN1-222	ENST00000485567	TCEAL1	Q15170	157 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	ANKRD34A	Q69YU3	496 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	CDC37L1	Q7L3B6	337 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	LILRB2	Q8N423	598 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	FAM13C	Q8NE31	585 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	TMEM87B	Q96K49	555 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	DHRS1	Q96LJ7	313 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	NOP53	Q9NZM5	478 aa	Known RBP	6	□□□□□ -1.45
FN1-222	ENST00000485567	KLHL3	Q9UH77	587 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	SBNO2	Q9Y2G9	1366 aa		6	□□□□□ -1.45
FN1-222	ENST00000485567	ANKRD62	A6NC57	917 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	CCDC85C	A6NKD9	419 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	UPK3BL1	B0FP48	263 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	UPK3BL2	E5RIL1	263 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	RGS13	O14921	159 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	RAG1	P15918	1043 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	CHMP4BP1	P59074	171 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	ZYX	Q15942	572 aa	Known RBP	5.99	□□□□□ -1.45
FN1-222	ENST00000485567	PRRT3	Q5FWE3	981 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	LCE2A	Q5TA79	106 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-222	ENST00000485567	VHLL	Q6RSH7	139 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-222	ENST00000485567	JMY	Q8N9B5	988 aa		5.99	□□□□□ -1.45
FN1-222	ENST00000485567	C12orf50	Q8NA57	414 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-222	ENST00000485567		F8W735	103 aa	Predicted RBP	5.98	□□□□□ -1.45
FN1-222	ENST00000485567	CST3	P01034	146 aa	Predicted RBP	5.98	□□□□□ -1.45
FN1-222	ENST00000485567	NEFM	P07197	916 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	SLBP	Q14493	270 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
FN1-222	ENST00000485567	TTLL4	Q14679	1199 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	BBS9	Q3SYG4	887 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	PLEKHG4	Q58EX7	1191 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	ZNF662	Q6ZS27	426 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	EEPD1	Q7L9B9	569 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	DYM	Q7RTS9	669 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	ZNF775	Q96BV0	537 aa	Predicted RBP	5.98	□□□□□ -1.45
FN1-222	ENST00000485567	CCDC74B	Q96LY2	380 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	EPN3	Q9H201	632 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567	ZNF214	Q9UL59	606 aa	Predicted RBP	5.98	□□□□□ -1.45
FN1-222	ENST00000485567	AP4E1	Q9UPM8	1137 aa		5.98	□□□□□ -1.45
FN1-222	ENST00000485567		B2RBV5	119 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	DRD2	P14416	443 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	ASPA	P45381	313 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	SLC7A5	Q01650	507 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	MTERF2	Q49AM1	385 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	FDX2	Q6P4F2	183 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	BEND7	Q8N7W2	519 aa	Predicted RBP	5.97	□□□□□ -1.45
FN1-222	ENST00000485567	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.97	□□□□□ -1.45
FN1-222	ENST00000485567	SH3TC2	Q8TF17	1288 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	THAP3	Q8WTV1	239 aa	Predicted RBP	5.97	□□□□□ -1.45
FN1-222	ENST00000485567	KLHL6	Q8WZ60	621 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	LENG1	Q96BZ8	264 aa	Predicted RBP	5.97	□□□□□ -1.45
FN1-222	ENST00000485567	FBRS	Q9HAH7	460 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	PIDD1	Q9HB75	910 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	PCOLCE2	Q9UKZ9	415 aa		5.97	□□□□□ -1.45
FN1-222	ENST00000485567	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	WIPF1	O43516	503 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	LRIG2	O94898	1065 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	ZNF143	P52747	638 aa	Predicted RBP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	PMS1	P54277	932 aa	Known RBP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	NKG7	Q16617	165 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	GNPTAB	Q3T906	1256 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	MRM1	Q6IN84	353 aa	Known RBP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	KIAA1211L	Q6NV74	962 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567		Q6ZS46	218 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	PHACTR4	Q8IZ21	702 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	MFSD2A	Q8NA29	543 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	CYB5D2	Q8WUJ1	264 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	APPBP2	Q92624	585 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	ISL2	Q96A47	359 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	KIF2C	Q99661	725 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	FOXQ1	Q9C009	403 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	TMX1	Q9H3N1	280 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	AKTIP	Q9H8T0	292 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	TMEM260	Q9NX78	707 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	SUCO	Q9UBS9	1254 aa	Known RBP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	ZMYM5	Q9UJ78	669 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.96	□□□□□ -1.46
FN1-222	ENST00000485567	ACTL7B	Q9Y614	415 aa		5.96	□□□□□ -1.46
FN1-222	ENST00000485567	C9orf172	C9J069	976 aa		5.95	□□□□□ -1.46
FN1-222	ENST00000485567	FAM229A	H3BQW9	127 aa		5.95	□□□□□ -1.46
FN1-222	ENST00000485567	RNGTT	O60942	597 aa	Known RBP	5.95	□□□□□ -1.46
FN1-222	ENST00000485567	SPATA31C1	P0DKV0	1188 aa		5.95	□□□□□ -1.46
FN1-222	ENST00000485567	HCLS1	P14317	486 aa	Predicted RBP	5.95	□□□□□ -1.46
FN1-222	ENST00000485567	POLR2B	P30876	1174 aa	Known RBP	5.95	□□□□□ -1.46
FN1-222	ENST00000485567	GBP1	P32455	592 aa		5.95	□□□□□ -1.46

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