RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RASA3Q14644 834 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 ANGEL2Q5VTE6 544 aaKnown RBP17.12■□□□□ 0.33
LRIF1-202ENST00000485275 TMEM87BQ96K49 555 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 MKNK2Q9HBH9 465 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 POTECB2RU33 542 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
LRIF1-202ENST00000485275 TFAP4Q01664 338 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 RRP1BQ14684 758 aaKnown RBP17.12■□□□□ 0.33
LRIF1-202ENST00000485275 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 RCSD1Q6JBY9 416 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 ZSCAN10Q96SZ4 725 aaPredicted RBP17.12■□□□□ 0.33
LRIF1-202ENST00000485275 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 PLIN4Q96Q06 1357 aa17.11■□□□□ 0.33
LRIF1-202ENST00000485275 TSPY2A6NKD2 308 aa17.11■□□□□ 0.33
LRIF1-202ENST00000485275 AKR1B1P15121 316 aa17.11■□□□□ 0.33
LRIF1-202ENST00000485275 FGD1P98174 961 aa17.11■□□□□ 0.33
LRIF1-202ENST00000485275 STK3Q13188 491 aa17.11■□□□□ 0.33
LRIF1-202ENST00000485275 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
LRIF1-202ENST00000485275 ADARB2Q9NS39 739 aaKnown RBP17.11■□□□□ 0.33
LRIF1-202ENST00000485275 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 LMOD1P29536 600 aaPredicted RBP17.1■□□□□ 0.33
LRIF1-202ENST00000485275 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
LRIF1-202ENST00000485275 JAG1P78504 1218 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 SSC5DA1L4H1 1573 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 LIFRP42702 1097 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 SCRN1Q12765 414 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 TATDN1Q6P1N9 297 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 APOA5Q6Q788 366 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 GTF3C6Q969F1 213 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 UBAC1Q9BSL1 405 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
LRIF1-202ENST00000485275 TSPY3P0CV98 308 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 TSPY8P0CW00 308 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 RXRAP19793 462 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 DDIT3P35638 169 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 WTAPQ15007 396 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 DLK2Q6UY11 383 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
LRIF1-202ENST00000485275 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
LRIF1-202ENST00000485275 NEDD1Q8NHV4 660 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
LRIF1-202ENST00000485275 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
LRIF1-202ENST00000485275 NCOA5Q9HCD5 579 aaKnown RBP17.09■□□□□ 0.33
LRIF1-202ENST00000485275 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
LRIF1-202ENST00000485275 IGKV6D-41A0A0C4DH26 115 aa17.08■□□□□ 0.33
LRIF1-202ENST00000485275 PFKFB2O60825 505 aa17.08■□□□□ 0.33
LRIF1-202ENST00000485275 IQCA1Q86XH1 822 aa17.08■□□□□ 0.33
LRIF1-202ENST00000485275 ZSCAN31Q96LW9 406 aaPredicted RBP17.08■□□□□ 0.33
LRIF1-202ENST00000485275 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 EPHX2P34913 555 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 PRAMEF18Q5VWM3 479 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
LRIF1-202ENST00000485275 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
LRIF1-202ENST00000485275 CEP95Q96GE4 821 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 ZNF287Q9HBT7 754 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
LRIF1-202ENST00000485275 ATAD5Q96QE3 1844 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 GDF11O95390 407 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 NOVP48745 357 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 TNNI2P48788 182 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
LRIF1-202ENST00000485275 SART3Q15020 963 aaKnown RBP17.07■□□□□ 0.32
LRIF1-202ENST00000485275 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 MICU3Q86XE3 530 aa17.07■□□□□ 0.32
LRIF1-202ENST00000485275 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
LRIF1-202ENST00000485275 NID2Q14112 1375 aa17.06■□□□□ 0.32
LRIF1-202ENST00000485275 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
LRIF1-202ENST00000485275 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
LRIF1-202ENST00000485275 CTDNEP1O95476 244 aa17.06■□□□□ 0.32
LRIF1-202ENST00000485275 GUCY1A2P33402 732 aa17.06■□□□□ 0.32
LRIF1-202ENST00000485275 MAP3K10Q02779 954 aa17.06■□□□□ 0.32
LRIF1-202ENST00000485275 IFIT1BQ5T764 474 aaKnown RBP17.06■□□□□ 0.32
LRIF1-202ENST00000485275 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
LRIF1-202ENST00000485275 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
LRIF1-202ENST00000485275 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
LRIF1-202ENST00000485275 HERC5Q9UII4 1024 aaKnown RBP17.06■□□□□ 0.32
LRIF1-202ENST00000485275 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
LRIF1-202ENST00000485275 ERICH2A1L162 156 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 CDC27P30260 824 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 NT5C2P49902 561 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 INTS4Q96HW7 963 aaKnown RBP17.05■□□□□ 0.32
LRIF1-202ENST00000485275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
LRIF1-202ENST00000485275 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.05■□□□□ 0.32
LRIF1-202ENST00000485275 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
LRIF1-202ENST00000485275 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms