RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 AMHR2Q16671 573 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 GJC2Q5T442 439 aaPredicted RBP8.01□□□□□ -1.13
CAPN13-206ENST00000485248 FKBP1CQ5VVH2 108 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 PARP9Q8IXQ6 854 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 TDRD7Q8NHU6 1098 aaKnown RBP8.01□□□□□ -1.13
CAPN13-206ENST00000485248 PRRX2Q99811 253 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 TMEM39AQ9NV64 488 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 BABAM1Q9NWV8 329 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 TRIM43BA6NCK2 446 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 TLL1O43897 1013 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 ITGA6P23229 1130 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 HDLBPQ00341 1268 aaKnown RBP8□□□□□ -1.13
CAPN13-206ENST00000485248 MAP2K5Q13163 448 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 PSRC1Q6PGN9 363 aaPredicted RBP8□□□□□ -1.13
CAPN13-206ENST00000485248 GJD3Q8N144 294 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
CAPN13-206ENST00000485248 TTLL11Q8NHH1 800 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 TBC1D22AQ8WUA7 517 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.13
CAPN13-206ENST00000485248 TRIM43Q96BQ3 446 aaPredicted RBP8□□□□□ -1.13
CAPN13-206ENST00000485248 NKX2-4Q9H2Z4 354 aa8□□□□□ -1.13
CAPN13-206ENST00000485248 RLFQ13129 1914 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 ANKRD18BA2A2Z9 1011 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 A6NJR5 290 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 PQBP1O60828 265 aaKnown RBP7.99□□□□□ -1.13
CAPN13-206ENST00000485248 TAF5LO75529 589 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 PTPRAP18433 802 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 ATP2B2Q01814 1243 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 NEXNQ0ZGT2 675 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 TCP10Q12799 353 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 WDR78Q5VTH9 848 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 C15orf52Q6ZUT6 534 aaKnown RBP7.99□□□□□ -1.13
CAPN13-206ENST00000485248 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 GPRC5AQ8NFJ5 357 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 FAM151AQ8WW52 585 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 CLUAP1Q96AJ1 413 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 GPHNQ9NQX3 736 aaPredicted RBP7.99□□□□□ -1.13
CAPN13-206ENST00000485248 ZNF112Q9UJU3 913 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 AFG3L2Q9Y4W6 797 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 PLXNB2O15031 1838 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 DOCK2Q92608 1830 aa7.99□□□□□ -1.13
CAPN13-206ENST00000485248 DOCK1Q14185 1865 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 PTPRFP10586 1907 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 GRXCR1A8MXD5 290 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 DCDC2CA8MYV0 355 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 DCXO43602 365 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 PLIN1O60240 522 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 TRAK2O60296 914 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 EPHB4P54760 987 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 TLE2Q04725 743 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 LMOD3Q0VAK6 560 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
CAPN13-206ENST00000485248 TAF7LQ5H9L4 462 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 TREML2Q5T2D2 321 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 ZSCAN29Q8IWY8 852 aaPredicted RBP7.98□□□□□ -1.13
CAPN13-206ENST00000485248 TMEM199Q8N511 208 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 SLC44A5Q8NCS7 719 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 FERMT2Q96AC1 680 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.98□□□□□ -1.13
CAPN13-206ENST00000485248 IRF2BPLQ9H1B7 796 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 LAS1LQ9Y4W2 734 aaKnown RBP7.98□□□□□ -1.13
CAPN13-206ENST00000485248 IVNS1ABPQ9Y6Y0 642 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 UTYO14607 1347 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 A0A0G2JMZ2 1700 aa7.98□□□□□ -1.13
CAPN13-206ENST00000485248 KIAA0355O15063 1070 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 HIBADHP31937 336 aaKnown RBP7.97□□□□□ -1.13
CAPN13-206ENST00000485248 ADCYAP1R1P41586 468 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 ID4P47928 161 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 SNX17Q15036 470 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 CCL14Q16627 93 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 EPHA10Q5JZY3 1008 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 PLEKHH3Q7Z736 793 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 EDC3Q96F86 508 aaKnown RBP7.97□□□□□ -1.13
CAPN13-206ENST00000485248 ZDHHC15Q96MV8 337 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 GOPCQ9HD26 462 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
CAPN13-206ENST00000485248 KRT37O76014 449 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 HOXB7P09629 217 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 CCNA1P78396 465 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 GPR142Q7Z601 462 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 SUGP1Q8IWZ8 645 aaKnown RBP7.96□□□□□ -1.14
CAPN13-206ENST00000485248 GTF3C2Q8WUA4 911 aaPredicted RBP7.96□□□□□ -1.14
CAPN13-206ENST00000485248 PHOX2BQ99453 314 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 ASCC2Q9H1I8 757 aaPredicted RBP7.96□□□□□ -1.14
CAPN13-206ENST00000485248 AS3MTQ9HBK9 375 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 CNNM1Q9NRU3 951 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 TMOD4Q9NZQ9 345 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 MORF4L1Q9UBU8 362 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 ZNF521Q96K83 1311 aa7.96□□□□□ -1.14
CAPN13-206ENST00000485248 LOC285556D6RIA3 1793 aa7.95□□□□□ -1.14
CAPN13-206ENST00000485248 CTNND1O60716 968 aaKnown RBP7.95□□□□□ -1.14
CAPN13-206ENST00000485248 HSPA5P11021 654 aaKnown RBP7.95□□□□□ -1.14
CAPN13-206ENST00000485248 SLC5A1P13866 664 aa7.95□□□□□ -1.14
CAPN13-206ENST00000485248 IFIT5Q13325 482 aaKnown RBP7.95□□□□□ -1.14
CAPN13-206ENST00000485248 PKN1Q16512 942 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms