RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SLC44A5Q8NCS7 719 aa19.49■□□□□ 0.71
DDR1-246ENST00000485023 A0A0G2JLL6 359 aaPredicted RBP19.48■□□□□ 0.71
DDR1-246ENST00000485023 USP17L5A8MUK1 530 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 CXCL11O14625 94 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 GH2P01242 217 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 ASNSP08243 561 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 SHMT1P34896 483 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 MOGSQ13724 837 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 ZMYM1Q5SVZ6 1142 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 CCDC129Q6ZRS4 1044 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 PRRT2Q7Z6L0 340 aaPredicted RBP19.48■□□□□ 0.71
DDR1-246ENST00000485023 AMOTL1Q8IY63 956 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 CASP8AP2Q9UKL3 1982 aa19.48■□□□□ 0.71
DDR1-246ENST00000485023 BAZ2AQ9UIF9 1905 aaKnown RBP19.47■□□□□ 0.71
DDR1-246ENST00000485023 PDHXO00330 501 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 APPP05067 770 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 CERKLQ49MI3 558 aaPredicted RBP19.47■□□□□ 0.71
DDR1-246ENST00000485023 TATDN1Q6P1N9 297 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 STK11IPQ8N1F8 1099 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 ZNF280CQ8ND82 737 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 CFHR5Q9BXR6 569 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 ZFYVE28Q9HCC9 887 aa19.47■□□□□ 0.71
DDR1-246ENST00000485023 GSG1L2A8MUP6 293 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 MPHOSPH10O00566 681 aaKnown RBP19.46■□□□□ 0.71
DDR1-246ENST00000485023 TDO2P48775 406 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 GABPAQ06546 454 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 C12orf60Q5U649 245 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 CTR9Q6PD62 1173 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 ANKRD23Q86SG2 305 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 AS3MTQ9HBK9 375 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 EPB41L4AQ9HCS5 686 aaPredicted RBP19.46■□□□□ 0.71
DDR1-246ENST00000485023 PCDH10Q9P2E7 1040 aa19.46■□□□□ 0.71
DDR1-246ENST00000485023 FKTNO75072 461 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 HMGCS2P54868 508 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 MTMR2Q13614 643 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 ABCB5Q2M3G0 1257 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 GPAT2Q6NUI2 795 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 FAM227BQ96M60 508 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 OSBPL3Q9H4L5 887 aa19.45■□□□□ 0.7
DDR1-246ENST00000485023 ARPP21Q9UBL0 812 aaPredicted RBP19.45■□□□□ 0.7
DDR1-246ENST00000485023 A0A0D9SFI3 127 aa19.44■□□□□ 0.7
DDR1-246ENST00000485023 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
DDR1-246ENST00000485023 ECM2O94769 699 aaPredicted RBP19.44■□□□□ 0.7
DDR1-246ENST00000485023 CYP2C8P10632 490 aa19.44■□□□□ 0.7
DDR1-246ENST00000485023 NMIQ13287 307 aaPredicted RBP19.44■□□□□ 0.7
DDR1-246ENST00000485023 TREML2Q5T2D2 321 aa19.44■□□□□ 0.7
DDR1-246ENST00000485023 FASTKD5Q7L8L6 764 aaKnown RBP19.44■□□□□ 0.7
DDR1-246ENST00000485023 GNAT2P19087 354 aa19.43■□□□□ 0.7
DDR1-246ENST00000485023 ZYXQ15942 572 aaKnown RBP19.43■□□□□ 0.7
DDR1-246ENST00000485023 TBC1D2Q9BYX2 928 aa19.43■□□□□ 0.7
DDR1-246ENST00000485023 MCOLN1Q9GZU1 580 aa19.43■□□□□ 0.7
DDR1-246ENST00000485023 ZCCHC17Q9NP64 241 aaKnown RBP19.43■□□□□ 0.7
DDR1-246ENST00000485023 CABP5Q9NP86 173 aa19.43■□□□□ 0.7
DDR1-246ENST00000485023 SWAP70Q9UH65 585 aa19.43■□□□□ 0.7
DDR1-246ENST00000485023 CDK8P49336 464 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 IFNL3Q8IZI9 196 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 CD99L2Q8TCZ2 262 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 PARK7Q99497 189 aaKnown RBP19.42■□□□□ 0.7
DDR1-246ENST00000485023 FEZ1Q99689 392 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 WDR18Q9BV38 432 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 GINM1Q9NU53 330 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 CPA4Q9UI42 421 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 PTPRFP10586 1907 aa19.42■□□□□ 0.7
DDR1-246ENST00000485023 PATL2C9JE40 543 aaKnown RBP19.41■□□□□ 0.7
DDR1-246ENST00000485023 AKR1B1P15121 316 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 SEPT2Q15019 361 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 NOM1Q5C9Z4 860 aaKnown RBP19.41■□□□□ 0.7
DDR1-246ENST00000485023 VPS53Q5VIR6 699 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 C16orf86Q6ZW13 317 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 CTU1Q7Z7A3 348 aaKnown RBP19.41■□□□□ 0.7
DDR1-246ENST00000485023 CLEC10AQ8IUN9 316 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 NACAP1Q9BZK3 213 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 AGTPBP1Q9UPW5 1226 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 LOC285556D6RIA3 1793 aa19.41■□□□□ 0.7
DDR1-246ENST00000485023 USP17L10C9JJH3 530 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 TLR2O60603 784 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 NEFLP07196 543 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 GSPT1P15170 499 aaKnown RBP19.4■□□□□ 0.7
DDR1-246ENST00000485023 SDSP20132 328 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 GUCY1A2P33402 732 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 BACE1P56817 501 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 SP3Q02447 781 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 GIMAP6Q6P9H5 292 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 ACER1Q8TDN7 264 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 NAPBQ9H115 298 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 HELLSQ9NRZ9 838 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
DDR1-246ENST00000485023 FOXP2O15409 715 aa19.39■□□□□ 0.69
DDR1-246ENST00000485023 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
DDR1-246ENST00000485023 ZNF589Q86UQ0 364 aaPredicted RBP19.39■□□□□ 0.69
DDR1-246ENST00000485023 SKAP1Q86WV1 359 aa19.39■□□□□ 0.69
DDR1-246ENST00000485023 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
DDR1-246ENST00000485023 SMCR8Q8TEV9 937 aaPredicted RBP19.39■□□□□ 0.69
DDR1-246ENST00000485023 DIAPH3Q9NSV4 1193 aa19.39■□□□□ 0.69
DDR1-246ENST00000485023 CAP1Q01518 475 aa19.38■□□□□ 0.69
DDR1-246ENST00000485023 MCMDC2Q4G0Z9 681 aa19.38■□□□□ 0.69
DDR1-246ENST00000485023 SH3D19Q5HYK7 790 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms