RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 CNTNAP4Q9C0A0 1308 aa5.95□□□□□ -1.46
VPS50-216ENST00000484954 OXCT1P55809 520 aa5.94□□□□□ -1.46
VPS50-216ENST00000484954 FGD1P98174 961 aa5.94□□□□□ -1.46
VPS50-216ENST00000484954 XPCQ01831 940 aaPredicted RBP5.94□□□□□ -1.46
VPS50-216ENST00000484954 SLBPQ14493 270 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS50-216ENST00000484954 TAF1CQ15572 869 aaPredicted RBP5.94□□□□□ -1.46
VPS50-216ENST00000484954 ARMCX6Q7L4S7 300 aa5.94□□□□□ -1.46
VPS50-216ENST00000484954 C1QL4Q86Z23 238 aa5.94□□□□□ -1.46
VPS50-216ENST00000484954 LRRC56Q8IYG6 542 aaPredicted RBP5.94□□□□□ -1.46
VPS50-216ENST00000484954 MISP3Q96FF7 219 aa5.94□□□□□ -1.46
VPS50-216ENST00000484954 PRDM10Q9NQV6 1147 aa5.94□□□□□ -1.46
VPS50-216ENST00000484954 USP31Q70CQ4 1352 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 GFRA2O00451 464 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 EOMESO95936 686 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 ITIH2P19823 946 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 RPS26P62854 115 aaKnown RBP5.93□□□□□ -1.46
VPS50-216ENST00000484954 HDXQ7Z353 690 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 ZSCAN18Q8TBC5 510 aaPredicted RBP5.93□□□□□ -1.46
VPS50-216ENST00000484954 NETO1Q8TDF5 533 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 WNT10AQ9GZT5 417 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 LMCD1Q9NZU5 365 aa5.93□□□□□ -1.46
VPS50-216ENST00000484954 SLITRK5O94991 958 aa5.92□□□□□ -1.46
VPS50-216ENST00000484954 ZSCAN22P10073 491 aaPredicted RBP5.92□□□□□ -1.46
VPS50-216ENST00000484954 GRK4P32298 578 aa5.92□□□□□ -1.46
VPS50-216ENST00000484954 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
VPS50-216ENST00000484954 CDC37L1Q7L3B6 337 aa5.92□□□□□ -1.46
VPS50-216ENST00000484954 ZNF507Q8TCN5 953 aa5.92□□□□□ -1.46
VPS50-216ENST00000484954 CRELD1Q96HD1 420 aa5.92□□□□□ -1.46
VPS50-216ENST00000484954 VTI1BQ9UEU0 232 aa5.92□□□□□ -1.46
VPS50-216ENST00000484954 SORBS3O60504 671 aa5.91□□□□□ -1.46
VPS50-216ENST00000484954 CEACAM5P06731 702 aa5.91□□□□□ -1.46
VPS50-216ENST00000484954 ETF1P62495 437 aaKnown RBP5.91□□□□□ -1.46
VPS50-216ENST00000484954 BHLHE22Q8NFJ8 381 aaPredicted RBP5.91□□□□□ -1.46
VPS50-216ENST00000484954 RIN3Q8TB24 985 aa5.91□□□□□ -1.46
VPS50-216ENST00000484954 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
VPS50-216ENST00000484954 NOC4LQ9BVI4 516 aaKnown RBP5.91□□□□□ -1.46
VPS50-216ENST00000484954 MIR1-1HGQ9H1L0 117 aa5.91□□□□□ -1.46
VPS50-216ENST00000484954 PRDM7Q9NQW5 492 aa5.91□□□□□ -1.46
VPS50-216ENST00000484954 SNCAIPQ9Y6H5 919 aa5.91□□□□□ -1.46
VPS50-216ENST00000484954 ZNF503-AS2A6NEH8 195 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 PRR33A8MZF0 331 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 LRIG2O94898 1065 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 AOC3Q16853 763 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 BNC2Q6ZN30 1099 aaPredicted RBP5.9□□□□□ -1.46
VPS50-216ENST00000484954 ZSWIM9Q86XI8 627 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 GIPC2Q8TF65 315 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 XAGE3Q8WTP9 111 aa5.9□□□□□ -1.46
VPS50-216ENST00000484954 LIN37Q96GY3 246 aaPredicted RBP5.9□□□□□ -1.46
VPS50-216ENST00000484954 DPH2Q9BQC3 489 aaPredicted RBP5.9□□□□□ -1.46
VPS50-216ENST00000484954 PF4P02776 101 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 LMNB1P20700 586 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 PRKCQQ04759 706 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 KCNMB1Q16558 191 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 IFI16Q16666 785 aaKnown RBP5.89□□□□□ -1.47
VPS50-216ENST00000484954 NKPD1Q17RQ9 610 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 PRAMEF13Q5VWM6 474 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 ARHGAP27Q6ZUM4 889 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 SYDE1Q6ZW31 735 aaPredicted RBP5.89□□□□□ -1.47
VPS50-216ENST00000484954 SPACA3Q8IXA5 215 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 MIPEPQ99797 713 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 BCL2L13Q9BXK5 485 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 FOXQ1Q9C009 403 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 TNKS2Q9H2K2 1166 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 TJP2Q9UDY2 1190 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 VAV3Q9UKW4 847 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 CORINQ9Y5Q5 1042 aa5.89□□□□□ -1.47
VPS50-216ENST00000484954 TSPAN15O95858 294 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 F13A1P00488 732 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 ERCC3P19447 782 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 CAP2P40123 477 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 CAMK2GQ13555 558 aaPredicted RBP5.88□□□□□ -1.47
VPS50-216ENST00000484954 TTLL10Q6ZVT0 673 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 ANKLE2Q86XL3 938 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 HID1Q8IV36 788 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 RHOVQ96L33 236 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 MKNK2Q9HBH9 465 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 MRS2Q9HD23 443 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 FAM53CQ9NYF3 392 aa5.88□□□□□ -1.47
VPS50-216ENST00000484954 FAM221AA4D161 298 aa5.87□□□□□ -1.47
VPS50-216ENST00000484954 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS50-216ENST00000484954 CST3P01034 146 aaPredicted RBP5.87□□□□□ -1.47
VPS50-216ENST00000484954 PGRP06401 933 aa5.87□□□□□ -1.47
VPS50-216ENST00000484954 RPL6Q02878 288 aaKnown RBP5.87□□□□□ -1.47
VPS50-216ENST00000484954 FAM160A1Q05DH4 1040 aa5.87□□□□□ -1.47
VPS50-216ENST00000484954 TSNAXIP1Q2TAA8 658 aa5.87□□□□□ -1.47
VPS50-216ENST00000484954 PRDM5Q9NQX1 630 aaPredicted RBP5.87□□□□□ -1.47
VPS50-216ENST00000484954 GTF2IRD1Q9UHL9 959 aa5.87□□□□□ -1.47
VPS50-216ENST00000484954 TMEM265A0A087WTH1 108 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 MINDY4BA8MYZ0 360 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 CILPO75339 1184 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 RLBP1P12271 317 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 GBP2P32456 591 aaPredicted RBP5.86□□□□□ -1.47
VPS50-216ENST00000484954 LMNB2Q03252 620 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 MRPL58Q14197 206 aaKnown RBP5.86□□□□□ -1.47
VPS50-216ENST00000484954 ANGEL2Q5VTE6 544 aaKnown RBP5.86□□□□□ -1.47
VPS50-216ENST00000484954 LETMD1Q6P1Q0 360 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 PRR23BQ6ZRT6 265 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms