RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 CALM1P0DP23 149 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 CALM2P0DP24 149 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 CALM3P0DP25 149 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 TFAP4Q01664 338 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 STRIP1Q5VSL9 837 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 ILDR1Q86SU0 546 aaPredicted RBP19.43■□□□□ 0.7
CTSA-207ENST00000484855 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 WASF1Q92558 559 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 TEKT1Q969V4 418 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
CTSA-207ENST00000484855 ZNF287Q9HBT7 754 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 KIAA2012Q0VF49 1180 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 ATL3Q6DD88 541 aa19.43■□□□□ 0.7
CTSA-207ENST00000484855 FKBP1AP62942 108 aaKnown RBP19.42■□□□□ 0.7
CTSA-207ENST00000484855 TRIM29Q14134 588 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 HHIPL2Q6UWX4 724 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 SLC44A5Q8NCS7 719 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 RBM28Q9NW13 759 aaKnown RBP19.42■□□□□ 0.7
CTSA-207ENST00000484855 TROAPQ12815 778 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 PICALMQ13492 652 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 DACT2Q5SW24 774 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 KRT40Q6A162 431 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 C16orf86Q6ZW13 317 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 NBPF11Q86T75 865 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 ZNF444Q8N0Y2 327 aaPredicted RBP19.42■□□□□ 0.7
CTSA-207ENST00000484855 TAOK2Q9UL54 1235 aa19.42■□□□□ 0.7
CTSA-207ENST00000484855 SYCE3A1L190 88 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 TSPY3P0CV98 308 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 TSPY8P0CW00 308 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 KIF23Q02241 960 aaPredicted RBP19.41■□□□□ 0.7
CTSA-207ENST00000484855 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 CCDC93Q567U6 631 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 BRAPQ7Z569 592 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 CMTR1Q8N1G2 835 aaKnown RBP19.41■□□□□ 0.7
CTSA-207ENST00000484855 CCDC82Q8N4S0 544 aa19.41■□□□□ 0.7
CTSA-207ENST00000484855 CRACR2BQ8N4Y2 399 aaPredicted RBP19.41■□□□□ 0.7
CTSA-207ENST00000484855 USP17L3A6NCW0 530 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 USP17L4A6NCW7 530 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 PPIP5K2O43314 1243 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 DPEP1P16444 411 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 MRE11P49959 708 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 CEBPZQ03701 1054 aaKnown RBP19.4■□□□□ 0.7
CTSA-207ENST00000484855 CCDC183Q5T5S1 534 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 USP17L1Q7RTZ2 530 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 GRPEL1Q9HAV7 217 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 UBE2Q2LH0YL09 131 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 DEXIO95424 95 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 CRKP46108 304 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 CCDC178Q5BJE1 867 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 USP40Q9NVE5 1235 aa19.4■□□□□ 0.7
CTSA-207ENST00000484855 KIF28PB7ZC32 967 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 RASA1P20936 1047 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 CDK8P49336 464 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 DGKHQ86XP1 1220 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 KIAA0825Q8IV33 1275 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 CTCFLQ8NI51 663 aaPredicted RBP19.39■□□□□ 0.69
CTSA-207ENST00000484855 RNF26Q9BY78 433 aaPredicted RBP19.39■□□□□ 0.69
CTSA-207ENST00000484855 FTOQ9C0B1 505 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTSA-207ENST00000484855 KAT14Q9H8E8 782 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 IL17RBQ9NRM6 502 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 WDHD1O75717 1129 aaPredicted RBP19.39■□□□□ 0.69
CTSA-207ENST00000484855 ZBTB7AO95365 584 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 KCNA3P22001 575 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 GUCY1A2P33402 732 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 RTKN2Q8IZC4 609 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 TCP11L1Q9NUJ3 509 aa19.39■□□□□ 0.69
CTSA-207ENST00000484855 AKAP17AQ02040 695 aaKnown RBP19.38■□□□□ 0.69
CTSA-207ENST00000484855 GNL2Q13823 731 aaKnown RBP19.38■□□□□ 0.69
CTSA-207ENST00000484855 MYSM1Q5VVJ2 828 aa19.38■□□□□ 0.69
CTSA-207ENST00000484855 APOBEC3HQ6NTF7 200 aaKnown RBP19.38■□□□□ 0.69
CTSA-207ENST00000484855 CDC42EP5Q6NZY7 148 aa19.38■□□□□ 0.69
CTSA-207ENST00000484855 LRSAM1Q6UWE0 723 aa19.38■□□□□ 0.69
CTSA-207ENST00000484855 ZDHHC15Q96MV8 337 aa19.38■□□□□ 0.69
CTSA-207ENST00000484855 DDX4Q9NQI0 724 aaKnown RBP19.38■□□□□ 0.69
CTSA-207ENST00000484855 PLEKHA8P1O95397 391 aa19.37■□□□□ 0.69
CTSA-207ENST00000484855 RCOR1Q9UKL0 485 aa19.37■□□□□ 0.69
CTSA-207ENST00000484855 XRCC6P12956 609 aaKnown RBP eCLIP19.37■□□□□ 0.69
CTSA-207ENST00000484855 TMTC3Q6ZXV5 915 aa19.37■□□□□ 0.69
CTSA-207ENST00000484855 ANKS1AQ92625 1134 aa19.37■□□□□ 0.69
CTSA-207ENST00000484855 PGBD1Q96JS3 809 aa19.37■□□□□ 0.69
CTSA-207ENST00000484855 MRIQ9BWK5 157 aa19.37■□□□□ 0.69
CTSA-207ENST00000484855 BRCA1P38398 1863 aaKnown RBP19.37■□□□□ 0.69
CTSA-207ENST00000484855 HDLBPQ00341 1268 aaKnown RBP19.36■□□□□ 0.69
CTSA-207ENST00000484855 PSMD1Q99460 953 aa19.36■□□□□ 0.69
CTSA-207ENST00000484855 GOLGB1Q14789 3259 aaKnown RBP19.36■□□□□ 0.69
CTSA-207ENST00000484855 FUT2Q10981 343 aa19.36■□□□□ 0.69
CTSA-207ENST00000484855 PNMA1Q8ND90 353 aa19.36■□□□□ 0.69
CTSA-207ENST00000484855 BICD2Q8TD16 824 aa19.36■□□□□ 0.69
CTSA-207ENST00000484855 OSBPL5Q9H0X9 879 aaPredicted RBP19.36■□□□□ 0.69
CTSA-207ENST00000484855 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
CTSA-207ENST00000484855 YDJCA8MPS7 323 aa19.35■□□□□ 0.69
CTSA-207ENST00000484855 PRPF3O43395 683 aaKnown RBP19.35■□□□□ 0.69
CTSA-207ENST00000484855 POLD1P28340 1107 aa19.35■□□□□ 0.69
CTSA-207ENST00000484855 RBM5P52756 815 aaKnown RBP eCLIP19.35■□□□□ 0.691e-13■■■□□ 18.6
CTSA-207ENST00000484855 CNTNAP5Q8WYK1 1306 aa19.35■□□□□ 0.69
CTSA-207ENST00000484855 MMP1P03956 469 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 LIG1P18858 919 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms