RNA–Protein interactions for RNA: ENST00000484804.5

GGA1-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 449 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-220ENST00000484804 NUCB1Q02818 461 aa17.36■□□□□ 0.37
GGA1-220ENST00000484804 TTC39AQ5SRH9 613 aa17.36■□□□□ 0.37
GGA1-220ENST00000484804 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
GGA1-220ENST00000484804 FAM151AQ8WW52 585 aa17.36■□□□□ 0.37
GGA1-220ENST00000484804 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
GGA1-220ENST00000484804 PDS5AQ29RF7 1337 aaKnown RBP17.36■□□□□ 0.37
GGA1-220ENST00000484804 TRIM75PA6NK02 468 aa17.35■□□□□ 0.37
GGA1-220ENST00000484804 FAM110CQ1W6H9 321 aa17.35■□□□□ 0.37
GGA1-220ENST00000484804 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
GGA1-220ENST00000484804 TTYH1Q9H313 450 aaPredicted RBP17.35■□□□□ 0.37
GGA1-220ENST00000484804 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
GGA1-220ENST00000484804 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
GGA1-220ENST00000484804 MAST3O60307 1309 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 COL6A1P12109 1028 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 SHHQ15465 462 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 SPATA5Q8NB90 893 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 WDR66Q8TBY9 1149 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 TRIB2Q92519 343 aa17.34■□□□□ 0.37
GGA1-220ENST00000484804 AK9Q5TCS8 1911 aa17.33■□□□□ 0.37
GGA1-220ENST00000484804 SALL3Q9BXA9 1300 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 SALL1Q9NSC2 1324 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 PTPRAP18433 802 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 CYP2B6P20813 491 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 CHD1LQ86WJ1 897 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 SCYL3Q8IZE3 742 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
GGA1-220ENST00000484804 LNPKQ9C0E8 428 aa17.33■□□□□ 0.36
GGA1-220ENST00000484804 SENP6Q9GZR1 1112 aaPredicted RBP17.33■□□□□ 0.36
GGA1-220ENST00000484804 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
GGA1-220ENST00000484804 CDH23Q9H251 3354 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 ATP5JP18859 108 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
GGA1-220ENST00000484804 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.32■□□□□ 0.36
GGA1-220ENST00000484804 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 AGTPBP1Q9UPW5 1226 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 AFG3L2Q9Y4W6 797 aa17.32■□□□□ 0.36
GGA1-220ENST00000484804 ZAP70P43403 619 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 SMAD3P84022 425 aaKnown RBP17.31■□□□□ 0.36
GGA1-220ENST00000484804 C9orf50Q5SZB4 431 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 PPM1EQ8WY54 764 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 GJD2Q9UKL4 321 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 SUGT1Q9Y2Z0 365 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 MYH13Q9UKX3 1938 aa17.31■□□□□ 0.36
GGA1-220ENST00000484804 CYP2E1P05181 493 aaPredicted RBP17.3■□□□□ 0.36
GGA1-220ENST00000484804 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
GGA1-220ENST00000484804 TREML2Q5T2D2 321 aa17.3■□□□□ 0.36
GGA1-220ENST00000484804 HHIPL2Q6UWX4 724 aa17.3■□□□□ 0.36
GGA1-220ENST00000484804 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
GGA1-220ENST00000484804 CCDC136Q96JN2 1154 aa17.3■□□□□ 0.36
GGA1-220ENST00000484804 MRIQ9BWK5 157 aa17.3■□□□□ 0.36
GGA1-220ENST00000484804 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 MX1P20591 662 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 PRDX5P30044 214 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
GGA1-220ENST00000484804 NFIAQ12857 509 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
GGA1-220ENST00000484804 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
GGA1-220ENST00000484804 PRDM5Q9NQX1 630 aaPredicted RBP17.29■□□□□ 0.36
GGA1-220ENST00000484804 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 NDUFB9Q9Y6M9 179 aa17.29■□□□□ 0.36
GGA1-220ENST00000484804 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
GGA1-220ENST00000484804 CCND3P30281 292 aaPredicted RBP17.28■□□□□ 0.36
GGA1-220ENST00000484804 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
GGA1-220ENST00000484804 MAP3K21Q5TCX8 1036 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 ZSCAN29Q8IWY8 852 aaPredicted RBP17.28■□□□□ 0.36
GGA1-220ENST00000484804 PI4K2BQ8TCG2 481 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 GPATCH3Q96I76 525 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
GGA1-220ENST00000484804 HAUS7Q99871 368 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 NUDT12Q9BQG2 462 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 BOLA2Q9H3K6 86 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 ABCF2Q9UG63 623 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 ATP11BQ9Y2G3 1177 aa17.28■□□□□ 0.36
GGA1-220ENST00000484804 PDE4AP27815 886 aa17.27■□□□□ 0.36
GGA1-220ENST00000484804 PDE1AP54750 535 aa17.27■□□□□ 0.36
GGA1-220ENST00000484804 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.36
GGA1-220ENST00000484804 CDC42EP5Q6NZY7 148 aa17.27■□□□□ 0.36
GGA1-220ENST00000484804 CCDC84Q86UT8 332 aaPredicted RBP17.27■□□□□ 0.36
GGA1-220ENST00000484804 ANTXR1Q9H6X2 564 aa17.27■□□□□ 0.36
GGA1-220ENST00000484804 PIH1D3Q9NQM4 214 aaKnown RBP17.27■□□□□ 0.36
GGA1-220ENST00000484804 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.27■□□□□ 0.36
GGA1-220ENST00000484804 PHF20L1A8MW92 1017 aa17.26■□□□□ 0.35
GGA1-220ENST00000484804 RTP1P59025 263 aa17.26■□□□□ 0.35
GGA1-220ENST00000484804 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
GGA1-220ENST00000484804 LHX8Q68G74 356 aa17.26■□□□□ 0.35
GGA1-220ENST00000484804 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
GGA1-220ENST00000484804 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
GGA1-220ENST00000484804 TRMT44Q8IYL2 757 aaKnown RBP17.26■□□□□ 0.35
GGA1-220ENST00000484804 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
GGA1-220ENST00000484804 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
GGA1-220ENST00000484804 HCN4Q9Y3Q4 1203 aa17.26■□□□□ 0.35
GGA1-220ENST00000484804 DNAH12Q6ZR08 3092 aa17.25■□□□□ 0.35
GGA1-220ENST00000484804 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
GGA1-220ENST00000484804 GRIN2CQ14957 1233 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms