RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 TSPY3P0CV98 308 aa24.04■■□□□ 1.44
VCPKMT-203ENST00000484763 TSPY8P0CW00 308 aa24.04■■□□□ 1.44
VCPKMT-203ENST00000484763 EVCP57679 992 aa24.04■■□□□ 1.44
VCPKMT-203ENST00000484763 TFAP4Q01664 338 aa24.04■■□□□ 1.44
VCPKMT-203ENST00000484763 CUL4AQ13619 759 aa24.04■■□□□ 1.44
VCPKMT-203ENST00000484763 FOXP4Q8IVH2 680 aaPredicted RBP24.04■■□□□ 1.44
VCPKMT-203ENST00000484763 ASTN2O75129 1339 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 WTAPQ15007 396 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 METTL16Q86W50 562 aaKnown RBP24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 SPRYD3Q8NCJ5 442 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 TMEM39BQ9GZU3 492 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 SCN4AP35499 1836 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 SHMT1P34896 483 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 SGMS1Q86VZ5 419 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 ZNF274Q96GC6 653 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 DNAJC18Q9H819 358 aa24.03■■□□□ 1.44
VCPKMT-203ENST00000484763 KLF18A0A0U1RQI7 1052 aa24.02■■□□□ 1.44
VCPKMT-203ENST00000484763 RASA3Q14644 834 aa24.02■■□□□ 1.44
VCPKMT-203ENST00000484763 SEC23AQ15436 765 aa24.02■■□□□ 1.44
VCPKMT-203ENST00000484763 APOBEC3FQ8IUX4 373 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-203ENST00000484763 TMTC2Q8N394 836 aa24.02■■□□□ 1.44
VCPKMT-203ENST00000484763 HERC5Q9UII4 1024 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-203ENST00000484763 PLIN4Q96Q06 1357 aa24.01■■□□□ 1.43
VCPKMT-203ENST00000484763 CCDC178Q5BJE1 867 aa24.01■■□□□ 1.43
VCPKMT-203ENST00000484763 ANGEL2Q5VTE6 544 aaKnown RBP24.01■■□□□ 1.43
VCPKMT-203ENST00000484763 NFXL1Q6ZNB6 911 aa24.01■■□□□ 1.43
VCPKMT-203ENST00000484763 ENAHQ8N8S7 591 aaPredicted RBP24.01■■□□□ 1.43
VCPKMT-203ENST00000484763 WDR90Q96KV7 1748 aa24.01■■□□□ 1.43
VCPKMT-203ENST00000484763 DCAF8L1A6NGE4 600 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 CCDC69A6NI79 296 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 HIRAP54198 1017 aaPredicted RBP24■■□□□ 1.43
VCPKMT-203ENST00000484763 INTS4Q96HW7 963 aaKnown RBP24■■□□□ 1.43
VCPKMT-203ENST00000484763 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
VCPKMT-203ENST00000484763 SENP2Q9HC62 589 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 TCP11L1Q9NUJ3 509 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 GGA3Q9NZ52 723 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 BRPF3Q9ULD4 1205 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 NAP1L2Q9ULW6 460 aaPredicted RBP24■■□□□ 1.43
VCPKMT-203ENST00000484763 STK3Q13188 491 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 CCDC83Q8IWF9 413 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 NEDD1Q8NHV4 660 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 GTF3C6Q969F1 213 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 PGAP2Q9UHJ9 254 aa24■■□□□ 1.43
VCPKMT-203ENST00000484763 GREB1LQ9C091 1923 aaPredicted RBP23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 FAM196BA6NMK8 535 aa23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 GOLGA8BA8MQT2 603 aa23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 NMT2O60551 498 aa23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 PFKFB2O60825 505 aa23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 PDIA3P30101 505 aaKnown RBP23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 IFIT1BQ5T764 474 aaKnown RBP23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 NECAB1Q8N987 351 aa23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 PITPNM2Q9BZ72 1349 aa23.99■■□□□ 1.43
VCPKMT-203ENST00000484763 TATDN1Q6P1N9 297 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 APOA5Q6Q788 366 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 CCDC17Q96LX7 622 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 SCAF8Q9UPN6 1271 aaKnown RBP23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 SLC12A7Q9Y666 1083 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 SLURP2P0DP57 97 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 AKR1B1P15121 316 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 ST3GAL1Q11201 340 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 CDAN1Q8IWY9 1227 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 DEFB129Q9H1M3 183 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 IL17RBQ9NRM6 502 aa23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.98■■□□□ 1.43
VCPKMT-203ENST00000484763 IQCA1LA6NCM1 817 aa23.97■■□□□ 1.43
VCPKMT-203ENST00000484763 USP50Q70EL3 339 aaPredicted RBP23.97■■□□□ 1.43
VCPKMT-203ENST00000484763 DGKHQ86XP1 1220 aa23.97■■□□□ 1.43
VCPKMT-203ENST00000484763 TEPSINQ96N21 525 aa23.97■■□□□ 1.43
VCPKMT-203ENST00000484763 TBC1D12O60347 775 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 EPHX2P34913 555 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 SCRN1Q12765 414 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 CERKLQ49MI3 558 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 SYNE3Q6ZMZ3 975 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 ZBTB43O43298 467 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 RCSD1Q6JBY9 416 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 CHMP4CQ96CF2 233 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 HPS5Q9UPZ3 1129 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 PPP2R3BQ9Y5P8 575 aa23.96■■□□□ 1.43
VCPKMT-203ENST00000484763 RCAN1P53805 252 aa23.95■■□□□ 1.42
VCPKMT-203ENST00000484763 MICU3Q86XE3 530 aa23.95■■□□□ 1.42
VCPKMT-203ENST00000484763 ZNF654Q8IZM8 581 aa23.95■■□□□ 1.42
VCPKMT-203ENST00000484763 ANKS1AQ92625 1134 aa23.95■■□□□ 1.42
VCPKMT-203ENST00000484763 NID2Q14112 1375 aa23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 METAP2P50579 478 aaKnown RBP eCLIP23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 CCT2P78371 535 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 POLR2AP24928 1970 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 MPHOSPH10O00566 681 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 CATIPQ7Z7H3 387 aa23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 CEP95Q96GE4 821 aa23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 CWC22Q9HCG8 908 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 STX8Q9UNK0 236 aa23.94■■□□□ 1.42
VCPKMT-203ENST00000484763 IGKV6D-41A0A0C4DH26 115 aa23.93■■□□□ 1.42
VCPKMT-203ENST00000484763 RAB11FIP4Q86YS3 637 aa23.93■■□□□ 1.42
VCPKMT-203ENST00000484763 MYL10Q9BUA6 226 aa23.93■■□□□ 1.42
VCPKMT-203ENST00000484763 KAT14Q9H8E8 782 aa23.93■■□□□ 1.42
VCPKMT-203ENST00000484763 GOLGA8AA7E2F4 631 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms