RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 XRCC5P13010 732 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-208ENST00000484729 ZKSCAN1P17029 563 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB1-208ENST00000484729 JAG1P78504 1218 aa18.85■□□□□ 0.61
HLA-DQB1-208ENST00000484729 GPRC5AQ8NFJ5 357 aa18.85■□□□□ 0.61
HLA-DQB1-208ENST00000484729 AS3MTQ9HBK9 375 aa18.85■□□□□ 0.61
HLA-DQB1-208ENST00000484729 DNAH12Q6ZR08 3092 aa18.85■□□□□ 0.61
HLA-DQB1-208ENST00000484729 POTEB2H3BUK9 544 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 HERVK_113P62684 666 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 SHROOM1Q2M3G4 852 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 Q3C1V9 767 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 SOCS4Q8WXH5 440 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 NSUN4Q96CB9 384 aaKnown RBP18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 PORCNQ9H237 461 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 TMOD4Q9NZQ9 345 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 HMG20BQ9P0W2 317 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 RBPJLQ9UBG7 517 aa18.84■□□□□ 0.61
HLA-DQB1-208ENST00000484729 BACE1P56817 501 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 PDE3AQ14432 1141 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ZKSCAN2Q63HK3 967 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 TEX11Q8IYF3 940 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 TMEM57Q8N5G2 664 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 USP6NLQ92738 828 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 WDR18Q9BV38 432 aa18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 COL2A1P02458 1487 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB1-208ENST00000484729 LDHCP07864 332 aa18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 HOXA7P31268 230 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 GSTO1P78417 241 aa18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 POTEEQ6S8J3 1075 aa18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 SPATA5Q8NB90 893 aa18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 PAGR1Q9BTK6 254 aa18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 RAI14Q9P0K7 980 aa18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 HERC5Q9UII4 1024 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-208ENST00000484729 MAPK4P31152 587 aa18.81■□□□□ 0.6
HLA-DQB1-208ENST00000484729 MORN1Q5T089 497 aa18.81■□□□□ 0.6
HLA-DQB1-208ENST00000484729 FAM109BQ6ICB4 259 aaPredicted RBP18.81■□□□□ 0.6
HLA-DQB1-208ENST00000484729 GPR142Q7Z601 462 aa18.81■□□□□ 0.6
HLA-DQB1-208ENST00000484729 CCAR1Q8IX12 1150 aaKnown RBP18.81■□□□□ 0.6
HLA-DQB1-208ENST00000484729 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
HLA-DQB1-208ENST00000484729 GDF11O95390 407 aa18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 MAP4K4O95819 1239 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ARID4AP29374 1257 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 RGS2P41220 211 aa18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ERVK-9P63128 1117 aa18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ERVK-24P63145 666 aa18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 OS9Q13438 667 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 LBHD1Q9BQE6 289 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 SENP6Q9GZR1 1112 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 PI4KBQ9UBF8 816 aa18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 NDUFB9Q9Y6M9 179 aa18.8■□□□□ 0.6
HLA-DQB1-208ENST00000484729 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ASNSP08243 561 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 UQCRFS1P1P0C7P4 283 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 MCAMP43121 646 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 PLEKHH3Q7Z736 793 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 C1orf115Q9H7X2 142 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 DNAJC18Q9H819 358 aa18.79■□□□□ 0.6
HLA-DQB1-208ENST00000484729 C19orf81C9J6K1 198 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 USP17L10C9JJH3 530 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ATN1P54259 1190 aaPredicted RBP18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 APBA2Q99767 749 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 FLRT1Q9NZU1 646 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 LRP2BPQ9P2M1 347 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 EYSQ5T1H1 3165 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 VCANP13611 3396 aa18.78■□□□□ 0.6
HLA-DQB1-208ENST00000484729 POLA2Q14181 598 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 TTC39AQ5SRH9 613 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 MAPKAPK5Q8IW41 473 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 TGFBRAP1Q8WUH2 860 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 CWC22Q9HCG8 908 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 SNRKQ9NRH2 765 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 AATFQ9NY61 560 aaKnown RBP eCLIP18.77■□□□□ 0.6
HLA-DQB1-208ENST00000484729 MAP2K5Q13163 448 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 TNNI3KQ59H18 835 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ZNF697Q5TEC3 545 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 CRACR2BQ8N4Y2 399 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 EDC3Q96F86 508 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 DBNDD2Q9BQY9 259 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 NOL10Q9BSC4 688 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 DHX36Q9H2U1 1008 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 PALD1Q9ULE6 856 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ZBTB21Q9ULJ3 1066 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 FPGT-TNNI3KV9GXZ4 949 aa18.76■□□□□ 0.59
HLA-DQB1-208ENST00000484729 FRMPD3Q5JV73 1810 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 SURF6O75683 361 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 CNGA1P29973 690 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ZYXQ15942 572 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 CCDC158Q5M9N0 1113 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 WDR78Q5VTH9 848 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 MIER1Q8N108 512 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 CDX2Q99626 313 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 TRIM34Q9BYJ4 488 aa18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 GPR108Q9NPR9 543 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms