RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TTC41PQ6P2S7 1318 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 ADGRA2Q96PE1 1338 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 ASNSP08243 561 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 MX1P20591 662 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 PKN2Q16513 984 aaKnown RBP14.81□□□□□ -0.04
MSH5-216ENST00000484309 ZSCAN25Q6NSZ9 544 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 KBTBD3Q8NAB2 608 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 PARK7Q99497 189 aaKnown RBP14.81□□□□□ -0.04
MSH5-216ENST00000484309 EHD4Q9H223 541 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 EFCC1Q9HA90 598 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 AS3MTQ9HBK9 375 aa14.81□□□□□ -0.04
MSH5-216ENST00000484309 CYP2D7A0A087X1C5 515 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 SMIM22K7EJ46 135 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 ERC2O15083 957 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 GH2P01242 217 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 SOX10P56693 466 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 MTMR2Q13614 643 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 B4GALNT3Q6L9W6 998 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 C17orf99Q6UX52 265 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 SLC44A5Q8NCS7 719 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 GCC1Q96CN9 775 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 SLC4A4Q9Y6R1 1079 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 SALL3Q9BXA9 1300 aa14.8□□□□□ -0.04
MSH5-216ENST00000484309 SHMT1P34896 483 aa14.79□□□□□ -0.04
MSH5-216ENST00000484309 LACTBP83111 547 aaPredicted RBP14.79□□□□□ -0.04
MSH5-216ENST00000484309 CERKLQ49MI3 558 aaPredicted RBP14.79□□□□□ -0.04
MSH5-216ENST00000484309 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
MSH5-216ENST00000484309 DYNLL2Q96FJ2 89 aa14.79□□□□□ -0.04
MSH5-216ENST00000484309 LNPKQ9C0E8 428 aa14.79□□□□□ -0.04
MSH5-216ENST00000484309 AGTPBP1Q9UPW5 1226 aa14.79□□□□□ -0.04
MSH5-216ENST00000484309 M0R2C6 588 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 RNF113AO15541 343 aaKnown RBP14.78□□□□□ -0.04
MSH5-216ENST00000484309 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
MSH5-216ENST00000484309 IGHDP01880 384 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 CTGFP29279 349 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 KIF22Q14807 665 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 RAB3GAP1Q15042 981 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 ZYXQ15942 572 aaKnown RBP14.78□□□□□ -0.04
MSH5-216ENST00000484309 ABCB5Q2M3G0 1257 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 PROCA1Q8NCQ7 364 aaPredicted RBP14.78□□□□□ -0.04
MSH5-216ENST00000484309 OSBP2Q969R2 916 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 TBC1D2Q9BYX2 928 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 RWDD1Q9H446 243 aaPredicted RBP14.78□□□□□ -0.04
MSH5-216ENST00000484309 PTPN22Q9Y2R2 807 aa14.78□□□□□ -0.04
MSH5-216ENST00000484309 MPHOSPH10O00566 681 aaKnown RBP14.77□□□□□ -0.05
MSH5-216ENST00000484309 BCRP11274 1271 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 BACE1P56817 501 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 GABPAQ06546 454 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 AAMPQ13685 434 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 SMCR8Q8TEV9 937 aaPredicted RBP14.77□□□□□ -0.05
MSH5-216ENST00000484309 APPBP2Q92624 585 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.05
MSH5-216ENST00000484309 ATP8A2Q9NTI2 1148 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 PTCH2Q9Y6C5 1203 aa14.77□□□□□ -0.05
MSH5-216ENST00000484309 MYH4Q9Y623 1939 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 RBBP6Q7Z6E9 1792 aaKnown RBP14.76□□□□□ -0.05
MSH5-216ENST00000484309 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 USP17L12C9JPN9 530 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 USP17L21D6R901 530 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 PSMC4P43686 418 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 SH3D19Q5HYK7 790 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 SMC5Q8IY18 1101 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 STK11IPQ8N1F8 1099 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 DDRGK1Q96HY6 314 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 STRBPQ96SI9 672 aaKnown RBP14.76□□□□□ -0.05
MSH5-216ENST00000484309 FEZ1Q99689 392 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 CABP5Q9NP86 173 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 GINM1Q9NU53 330 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 TMOD4Q9NZQ9 345 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 SLC45A1Q9Y2W3 748 aa14.76□□□□□ -0.05
MSH5-216ENST00000484309 KIAA0100Q14667 2235 aaKnown RBP14.76□□□□□ -0.05
MSH5-216ENST00000484309 GREB1LQ9C091 1923 aaPredicted RBP14.75□□□□□ -0.05
MSH5-216ENST00000484309 GPAA1O43292 621 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 FMNL1O95466 1100 aaPredicted RBP14.75□□□□□ -0.05
MSH5-216ENST00000484309 ZFYP08048 801 aaPredicted RBP14.75□□□□□ -0.05
MSH5-216ENST00000484309 GUCY1A2P33402 732 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 PDE1AP54750 535 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 SEPT2Q15019 361 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 C12orf60Q5U649 245 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 CLEC10AQ8IUN9 316 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 AMOTL1Q8IY63 956 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 ANKRD13CQ8N6S4 541 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 ACER1Q8TDN7 264 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 TRIM47Q96LD4 638 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 ASCC2Q9H1I8 757 aaPredicted RBP14.75□□□□□ -0.05
MSH5-216ENST00000484309 PNMA3Q9UL41 463 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 PARP14Q460N5 1801 aa14.75□□□□□ -0.05
MSH5-216ENST00000484309 GSG1L2A8MUP6 293 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 PEX10O60683 326 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 AKR1B1P15121 316 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.05
MSH5-216ENST00000484309 ARHGEF6Q15052 776 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 CTR9Q6PD62 1173 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 EPB41L4AQ9HCS5 686 aaPredicted RBP14.74□□□□□ -0.05
MSH5-216ENST00000484309 EMILIN3Q9NT22 766 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 STAP2Q9UGK3 403 aa14.74□□□□□ -0.05
MSH5-216ENST00000484309 PLXNB2O15031 1838 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 C19orf81C9J6K1 198 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms