RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 PHACTR3Q96KR7 559 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 THSD7BQ9C0I4 1608 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 ABCC12Q96J65 1359 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 COL4A5P29400 1685 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 FAM181BA6NEQ2 426 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 CCDC85CA6NKD9 419 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 FAM157BP0CG42 384 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 ALDH1B1P30837 517 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 MAP2K3P46734 347 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 EIF6P56537 245 aaKnown RBP7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 DGKZQ13574 1117 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 RTF1Q92541 710 aaKnown RBP7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 CAPNS2Q96L46 248 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 CXXC1Q9P0U4 656 aaPredicted RBP7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 LTBP1Q14766 1721 aa7.97□□□□□ -1.13
SEMA3D-204ENST00000484038 LAMB4A4D0S4 1761 aa7.96□□□□□ -1.13
SEMA3D-204ENST00000484038 ECE1P42892 770 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 CTBSQ01459 385 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 TNP2Q05952 138 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 FMR1Q06787 632 aaKnown RBP eCLIP7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 HLFQ16534 295 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 OCLNQ16625 522 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 CYP4F22Q6NT55 531 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 NGEFQ8N5V2 710 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 PSMD1Q99460 953 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 KLK14Q9P0G3 267 aa7.96□□□□□ -1.14
SEMA3D-204ENST00000484038 SNED1Q8TER0 1413 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 TRAF5O00463 557 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 TCERG1O14776 1098 aaKnown RBP7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 EPS15P42566 896 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 DCTN1Q14203 1278 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 CFAP53Q96M91 514 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 NYXQ9GZU5 481 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 BRD7Q9NPI1 651 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 MARK1Q9P0L2 795 aa7.95□□□□□ -1.14
SEMA3D-204ENST00000484038 CARNS1A5YM72 827 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 MLLT1Q03111 559 aaPredicted RBP7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 NAA30Q147X3 362 aaPredicted RBP7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 CRY2Q49AN0 593 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 SLC51AQ86UW1 340 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 NIM1KQ8IY84 436 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 CCER1Q8TC90 406 aaPredicted RBP7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 GPR101Q96P66 508 aaPredicted RBP7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 PRR12Q9ULL5 1215 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 NPC1L1Q9UHC9 1359 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 TRPM7Q96QT4 1865 aa7.94□□□□□ -1.14
SEMA3D-204ENST00000484038 AOC2O75106 756 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 GPTP24298 496 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 CST9Q5W186 159 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 ZNF385CQ66K41 422 aaPredicted RBP7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 KIF6Q6ZMV9 814 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 BTLAQ7Z6A9 289 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 WHAMMQ8TF30 809 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 OXCT2Q9BYC2 517 aaPredicted RBP7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 NUDCQ9Y266 331 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 NUP98P52948 1817 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 TGFBR3LH3BV60 316 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 PPIP5K2O43314 1243 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 MYL6BP14649 208 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 TYRO3Q06418 890 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 LYPD4Q6UWN0 246 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 USP50Q70EL3 339 aaPredicted RBP7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 ZNF408Q9H9D4 720 aa7.93□□□□□ -1.14
SEMA3D-204ENST00000484038 MAP3K15Q6ZN16 1313 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 UBN2Q6ZU65 1347 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 RIC1Q4ADV7 1423 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 C2CD2LO14523 706 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 EFSO43281 561 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 CELF2O95319 508 aaKnown RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 HOXA10P31260 410 aaPredicted RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 SFSWAPQ12872 951 aaKnown RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 TAF7Q15545 349 aaPredicted RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 AOC3Q16853 763 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 C16orf46Q6P387 395 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 ACDQ96AP0 544 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 RBM17Q96I25 401 aaKnown RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 TMX4Q9H1E5 349 aaPredicted RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 ADARB2Q9NS39 739 aaKnown RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 GPRC5DQ9NZD1 345 aa7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 RRP7AQ9Y3A4 280 aaKnown RBP7.92□□□□□ -1.14
SEMA3D-204ENST00000484038 KDM3BQ7LBC6 1761 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 CELA2BP08218 269 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms