RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CCDC178Q5BJE1 867 aa16.47■□□□□ 0.23
SMAD9-204ENST00000483941 MAPKAPK5Q8IW41 473 aa16.47■□□□□ 0.23
SMAD9-204ENST00000483941 TBC1D2Q9BYX2 928 aa16.47■□□□□ 0.23
SMAD9-204ENST00000483941 MYOZ2Q9NPC6 264 aa16.47■□□□□ 0.23
SMAD9-204ENST00000483941 ERICH2A1L162 156 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 ORC4O43929 436 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
SMAD9-204ENST00000483941 FGRP09769 529 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 TNNI2P48788 182 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 FKBP1BP68106 108 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 TNFAIP1Q13829 316 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 TMTC2Q8N394 836 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 TMEM87BQ96K49 555 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 TTC14Q96N46 770 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
SMAD9-204ENST00000483941 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
SMAD9-204ENST00000483941 TOMM22Q9NS69 142 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 LIMCH1Q9UPQ0 1083 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 BRCA2P51587 3418 aa16.46■□□□□ 0.23
SMAD9-204ENST00000483941 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
SMAD9-204ENST00000483941 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
SMAD9-204ENST00000483941 PICALMQ13492 652 aa16.45■□□□□ 0.22
SMAD9-204ENST00000483941 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
SMAD9-204ENST00000483941 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
SMAD9-204ENST00000483941 IQCA1Q86XH1 822 aa16.45■□□□□ 0.22
SMAD9-204ENST00000483941 ZNF296Q8WUU4 475 aaPredicted RBP16.45■□□□□ 0.22
SMAD9-204ENST00000483941 PRMT6Q96LA8 375 aaPredicted RBP16.45■□□□□ 0.22
SMAD9-204ENST00000483941 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
SMAD9-204ENST00000483941 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
SMAD9-204ENST00000483941 ROBO3Q96MS0 1386 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 SPDYE2Q495Y8 402 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 FAM83AQ86UY5 434 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 TBC1D10CQ8IV04 446 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 FOXP4Q8IVH2 680 aaPredicted RBP16.44■□□□□ 0.22
SMAD9-204ENST00000483941 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
SMAD9-204ENST00000483941 ZNF444Q8N0Y2 327 aaPredicted RBP16.44■□□□□ 0.22
SMAD9-204ENST00000483941 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 EHD4Q9H223 541 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 TDRD3Q9H7E2 651 aaKnown RBP16.44■□□□□ 0.22
SMAD9-204ENST00000483941 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
SMAD9-204ENST00000483941 PRC1O43663 620 aa16.43■□□□□ 0.22
SMAD9-204ENST00000483941 AK2P54819 239 aa16.43■□□□□ 0.22
SMAD9-204ENST00000483941 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
SMAD9-204ENST00000483941 ZBED3Q96IU2 234 aaPredicted RBP16.43■□□□□ 0.22
SMAD9-204ENST00000483941 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
SMAD9-204ENST00000483941 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
SMAD9-204ENST00000483941 PITPNM2Q9BZ72 1349 aa16.43■□□□□ 0.22
SMAD9-204ENST00000483941 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
SMAD9-204ENST00000483941 RBBP6Q7Z6E9 1792 aaKnown RBP16.42■□□□□ 0.22
SMAD9-204ENST00000483941 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 RRP12Q5JTH9 1297 aaKnown RBP16.42■□□□□ 0.22
SMAD9-204ENST00000483941 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
SMAD9-204ENST00000483941 Q6ZUG5 572 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 C16orf86Q6ZW13 317 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 ZSCAN29Q8IWY8 852 aaPredicted RBP16.42■□□□□ 0.22
SMAD9-204ENST00000483941 FAM151AQ8WW52 585 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
SMAD9-204ENST00000483941 SERPINB13Q9UIV8 391 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 TAF6LQ9Y6J9 622 aa16.42■□□□□ 0.22
SMAD9-204ENST00000483941 ZNF646O15015 1829 aaPredicted RBP16.41■□□□□ 0.22
SMAD9-204ENST00000483941 B4E1Z4 1266 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 WNT10BO00744 389 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
SMAD9-204ENST00000483941 KDM4AO75164 1064 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
SMAD9-204ENST00000483941 HOOK2Q96ED9 719 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 ZSWIM5Q9P217 1185 aa16.41■□□□□ 0.22
SMAD9-204ENST00000483941 ANGEL1Q9UNK9 670 aaKnown RBP16.41■□□□□ 0.22
SMAD9-204ENST00000483941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMAD9-204ENST00000483941 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 IFIT3O14879 490 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 CPA1P15085 419 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 LIFRP42702 1097 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 NFIAQ12857 509 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 NOM1Q5C9Z4 860 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 MOB2Q70IA6 237 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 ZNF274Q96GC6 653 aaPredicted RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 TMX3Q96JJ7 454 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 CCDC17Q96LX7 622 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 FAM198AQ9UFP1 575 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
SMAD9-204ENST00000483941 NEDD4P46934 1319 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
SMAD9-204ENST00000483941 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 CYP2D7A0A087X1C5 515 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 GPR25O00155 361 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
SMAD9-204ENST00000483941 CYP2D6P10635 497 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 CDK8P49336 464 aa16.39■□□□□ 0.21
SMAD9-204ENST00000483941 PLCD1P51178 756 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms