RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 F6X3S4 739 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 NNTQ13423 1086 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 ASIC2Q16515 512 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 SNX16P57768 344 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 VWA3BQ502W6 1294 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 NOP14P78316 857 aaKnown RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 THOC1Q96FV9 657 aaKnown RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 BIN2Q9UBW5 565 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 ZBTB43O43298 467 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 GIMAP4Q9NUV9 329 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 GUCY2DQ02846 1103 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 PEX26Q7Z412 305 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 EPHB4P54760 987 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 CNOT10Q9H9A5 744 aaKnown RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 MCF2P10911 925 aa11.32□□□□□ -0.6
COL12A1-207ENST00000483888 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-207ENST00000483888 CCDC169A6NNP5 214 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 SNX1Q13596 522 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 SLC9C1Q4G0N8 1177 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 MIS18AQ9NYP9 233 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 NR1I2O75469 434 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 SDCCAG3Q96C92 435 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 CYTH2Q99418 400 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 P3H4Q92791 437 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 CCDC138Q96M89 665 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
COL12A1-207ENST00000483888 IL9RQ01113 521 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 MFSD4BQ5TF39 518 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 ALS2CLQ60I27 953 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 DBNLQ9UJU6 430 aaKnown RBP11.31□□□□□ -0.6
COL12A1-207ENST00000483888 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 H0Y3Z8 333 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 KRIT1O00522 736 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
COL12A1-207ENST00000483888 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 HYOU1Q9Y4L1 999 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
COL12A1-207ENST00000483888 OCA2Q04671 838 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 RMI1Q9H9A7 625 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 SH3BP5O60239 455 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 LGSNQ5TDP6 509 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 PPWD1Q96BP3 646 aaKnown RBP11.31□□□□□ -0.6
COL12A1-207ENST00000483888 NFE2L3Q9Y4A8 694 aa11.31□□□□□ -0.6
COL12A1-207ENST00000483888 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 SART1O43290 800 aaKnown RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 DCAF17Q5H9S7 520 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 TEX9Q8N6V9 391 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 IBTKQ9P2D0 1353 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 BASP1P80723 227 aaKnown RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 LRGUKQ96M69 825 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 CYP2C19P33261 490 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 USP37Q86T82 979 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 CRYMQ14894 314 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 NXNQ6DKJ4 435 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 ZNF449Q6P9G9 518 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 MFSD6Q6ZSS7 791 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 MLKLQ8NB16 471 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 TPD52L2O43399 206 aaKnown RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 THAP12O43422 761 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 RTN1Q16799 776 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 MSANTD4Q8NCY6 345 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 VPS37BQ9H9H4 285 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-207ENST00000483888 CNGB3Q9NQW8 809 aa11.3□□□□□ -0.6
COL12A1-207ENST00000483888 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 TSPY1Q01534 308 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 GRAMD1BQ3KR37 738 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 KIFAP3Q92845 792 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms