RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ATRNL1Q5VV63 1379 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 IFIT3O14879 490 aaKnown RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 SART3Q15020 963 aaKnown RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 FOXP4Q8IVH2 680 aaPredicted RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 IGDCC4Q8TDY8 1250 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 SWAP70Q9UH65 585 aa20.12■□□□□ 0.81
MRPL28-210ENST00000483764 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
MRPL28-210ENST00000483764 COL2A1P02458 1487 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-210ENST00000483764 CNTNAP1P78357 1384 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 SH2B2O14492 632 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-210ENST00000483764 RASA1P20936 1047 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 TNNI2P48788 182 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 TMEM67Q5HYA8 995 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 FAM47AQ5JRC9 791 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 ZKSCAN3Q9BRR0 538 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
MRPL28-210ENST00000483764 GLTPD2A6NH11 291 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 TSPY2A6NKD2 308 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 TFAP4Q01664 338 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 APOBRQ0VD83 1088 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 TNFAIP1Q13829 316 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 ME3Q16798 604 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 IQCA1Q86XH1 822 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 CRACR2BQ8N4Y2 399 aaPredicted RBP20.1■□□□□ 0.81
MRPL28-210ENST00000483764 L3MBTL3Q96JM7 780 aaPredicted RBP20.1■□□□□ 0.81
MRPL28-210ENST00000483764 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
MRPL28-210ENST00000483764 ASTN2O75129 1339 aaPredicted RBP20.1■□□□□ 0.81
MRPL28-210ENST00000483764 ERICH2A1L162 156 aa20.09■□□□□ 0.81
MRPL28-210ENST00000483764 LIFRP42702 1097 aa20.09■□□□□ 0.81
MRPL28-210ENST00000483764 EVCP57679 992 aa20.09■□□□□ 0.81
MRPL28-210ENST00000483764 METTL16Q86W50 562 aaKnown RBP20.09■□□□□ 0.81
MRPL28-210ENST00000483764 CSRNP1Q96S65 589 aa20.09■□□□□ 0.81
MRPL28-210ENST00000483764 ZSCAN10Q96SZ4 725 aaPredicted RBP20.09■□□□□ 0.81
MRPL28-210ENST00000483764 ADARB2Q9NS39 739 aaKnown RBP20.09■□□□□ 0.81
MRPL28-210ENST00000483764 ATP6V1DQ9Y5K8 247 aa20.09■□□□□ 0.81
MRPL28-210ENST00000483764 LARGE1O95461 756 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 TSPY3P0CV98 308 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 TSPY8P0CW00 308 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 HIRAP54198 1017 aaPredicted RBP20.08■□□□□ 0.81
MRPL28-210ENST00000483764 ZNF445P59923 1031 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 RASA3Q14644 834 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 MCTP1Q6DN14 999 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 TRIM34Q9BYJ4 488 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 TMEM39BQ9GZU3 492 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 GRPEL1Q9HAV7 217 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 LY9Q9HBG7 655 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 LMBRD1Q9NUN5 540 aa20.08■□□□□ 0.81
MRPL28-210ENST00000483764 DCAF8L1A6NGE4 600 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 SHMT1P34896 483 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 WTAPQ15007 396 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 TMTC2Q8N394 836 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
MRPL28-210ENST00000483764 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
MRPL28-210ENST00000483764 TNKSO95271 1327 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 KLF18A0A0U1RQI7 1052 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 XRCC6P12956 609 aaKnown RBP eCLIP20.07■□□□□ 0.8
MRPL28-210ENST00000483764 SEC23AQ15436 765 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 ANGEL2Q5VTE6 544 aaKnown RBP20.07■□□□□ 0.8
MRPL28-210ENST00000483764 NFXL1Q6ZNB6 911 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 SGMS1Q86VZ5 419 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 SENP2Q9HC62 589 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 PGAP2Q9UHJ9 254 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
MRPL28-210ENST00000483764 SLURP2P0DP57 97 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 PDIA3P30101 505 aaKnown RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 STK3Q13188 491 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 CCDC178Q5BJE1 867 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 APOBEC3FQ8IUX4 373 aaKnown RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 FAM43AQ8N2R8 423 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 ENAHQ8N8S7 591 aaPredicted RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 NECAB1Q8N987 351 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 NEDD1Q8NHV4 660 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 SYAP1Q96A49 352 aaPredicted RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 TCP11L1Q9NUJ3 509 aa20.06■□□□□ 0.8
MRPL28-210ENST00000483764 HERC5Q9UII4 1024 aaKnown RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 NAP1L2Q9ULW6 460 aaPredicted RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 SCAF8Q9UPN6 1271 aaKnown RBP20.06■□□□□ 0.8
MRPL28-210ENST00000483764 CCDC69A6NI79 296 aa20.05■□□□□ 0.8
MRPL28-210ENST00000483764 NMT2O60551 498 aa20.05■□□□□ 0.8
MRPL28-210ENST00000483764 CSPP1Q1MSJ5 1256 aa20.05■□□□□ 0.8
MRPL28-210ENST00000483764 TATDN1Q6P1N9 297 aa20.05■□□□□ 0.8
MRPL28-210ENST00000483764 DEFB129Q9H1M3 183 aa20.05■□□□□ 0.8
MRPL28-210ENST00000483764 IL17RBQ9NRM6 502 aa20.05■□□□□ 0.8
MRPL28-210ENST00000483764 FAM196BA6NMK8 535 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 PFKFB2O60825 505 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 DGKHQ86XP1 1220 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 CCDC83Q8IWF9 413 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 CDAN1Q8IWY9 1227 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 CCDC17Q96LX7 622 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 GGA3Q9NZ52 723 aa20.04■□□□□ 0.8
MRPL28-210ENST00000483764 AKR1B1P15121 316 aa20.03■□□□□ 0.8
MRPL28-210ENST00000483764 NCLP19338 710 aaKnown RBP20.03■□□□□ 0.8
MRPL28-210ENST00000483764 IFIT1BQ5T764 474 aaKnown RBP20.03■□□□□ 0.8
MRPL28-210ENST00000483764 APOA5Q6Q788 366 aa20.03■□□□□ 0.8
MRPL28-210ENST00000483764 SYNE3Q6ZMZ3 975 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms