RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SHISA4Q96DD7 197 aa10.29□□□□□ -0.76
CDC42SE1-204ENST00000483763 RCOR1Q9UKL0 485 aa10.29□□□□□ -0.76
CDC42SE1-204ENST00000483763 CFAP45Q9UL16 551 aa10.29□□□□□ -0.76
CDC42SE1-204ENST00000483763 DAGLAQ9Y4D2 1042 aa10.29□□□□□ -0.76
CDC42SE1-204ENST00000483763 GAKO14976 1311 aa10.29□□□□□ -0.76
CDC42SE1-204ENST00000483763 hCG_1642624A0A1W2PR95 340 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 CDKL5O76039 1030 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 FMNL1O95466 1100 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 LDHCP07864 332 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 PCP11498 1178 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 KCNA3P22001 575 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 FUT2Q10981 343 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 CCDC183Q5T5S1 534 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 BCS1LQ9Y276 419 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 CLIC4Q9Y696 253 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 SLX4Q8IY92 1834 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 TSPY2A6NKD2 308 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 NR1I2O75469 434 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 PLEKHA8P1O95397 391 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 SCNN1DP51172 638 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 TFAP4Q01664 338 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 PDE4BQ07343 736 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 CAMK4Q16566 473 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 STYK1Q6J9G0 422 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 CPLX2Q6PUV4 134 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 RNF214Q8ND24 703 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
CDC42SE1-204ENST00000483763 FLT1P17948 1338 aa10.27□□□□□ -0.76
CDC42SE1-204ENST00000483763 USP17L3A6NCW0 530 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 USP17L4A6NCW7 530 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 NASPP49321 788 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 SSRP1Q08945 709 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 USP17L1Q7RTZ2 530 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 TEX11Q8IYF3 940 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 SYAP1Q96A49 352 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 ZMYND15Q9H091 742 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 KCNJ14Q9UNX9 436 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 TTF2Q9UNY4 1162 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 PCDHAC2Q9Y5I4 1007 aa10.27□□□□□ -0.77
CDC42SE1-204ENST00000483763 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 NOL10Q9BSC4 688 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 CEP350Q5VT06 3117 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 GOLGA6L4A6NEF3 574 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 VEGFAP15692 232 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 RCAN1P53805 252 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 PKN1Q16512 942 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 LINC00301Q8NCQ3 95 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 GOLPH3LQ9H4A5 285 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 DDX4Q9NQI0 724 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 RTEL1Q9NZ71 1219 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 CD2APQ9Y5K6 639 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 SNED1Q8TER0 1413 aa10.26□□□□□ -0.77
CDC42SE1-204ENST00000483763 ROBO3Q96MS0 1386 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 CCDC196A0A1B0GTZ2 297 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 BTBD18B2RXH4 712 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 G3V3G9 751 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 WDHD1O75717 1129 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 SLURP2P0DP57 97 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 RASA1P20936 1047 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 U2AF2P26368 475 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■■□□□ 11.5
CDC42SE1-204ENST00000483763 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 SRBD1Q8N5C6 995 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 ZNF526Q8TF50 670 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 PCDHA7Q9UN72 937 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 LAMB1P07942 1786 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 PICALMQ13492 652 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 APOBEC3HQ6NTF7 200 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 BRAPQ7Z569 592 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 PODNQ7Z5L7 613 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 ZNF396Q96N95 335 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 PCNTO95613 3336 aa10.25□□□□□ -0.77
CDC42SE1-204ENST00000483763 CDK5RAP2Q96SN8 1893 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 C21orf2O43822 256 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 YY1P25490 414 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 ME1P48163 572 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 CDK8P49336 464 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 NR5A1Q13285 461 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 AOC3Q16853 763 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 ATL3Q6DD88 541 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 ARHGAP27Q6ZUM4 889 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 RASGRP2Q7LDG7 609 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 KIAA0825Q8IV33 1275 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 TRIM22Q8IYM9 498 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 TSPY26PQ9H489 355 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms