RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 PASKQ96RG2 1323 aa5.47□□□□□ -1.53
HDAC9-224ENST00000483142 PARP14Q460N5 1801 aa5.46□□□□□ -1.53
HDAC9-224ENST00000483142 NID2Q14112 1375 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 GRXCR2A6NFK2 248 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 EVI5O60447 810 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 CYP21A2P08686 494 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 POTEJP0CG39 1038 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 NOVP48745 357 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 TNNI2P48788 182 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 PPARAQ07869 468 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 PDE4DQ08499 809 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 NOL9Q5SY16 702 aaKnown RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 ANGEL2Q5VTE6 544 aaKnown RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 TATDN1Q6P1N9 297 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 CTR9Q6PD62 1173 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 C16orf86Q6ZW13 317 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 SH3BP5LQ7L8J4 393 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 TBC1D10CQ8IV04 446 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 MAPKAPK5Q8IW41 473 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 TBC1D32Q96NH3 1257 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 DCBLD2Q96PD2 775 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 USP26Q9BXU7 913 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 NACAP1Q9BZK3 213 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 NAPBQ9H115 298 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 BCL11AQ9H165 835 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 KDM4CQ9H3R0 1056 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 ANO2Q9NQ90 1003 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 NPDC1Q9NQX5 325 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 SWAP70Q9UH65 585 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 CTNNA3Q9UI47 895 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 HERC5Q9UII4 1024 aaKnown RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 RBM8AQ9Y5S9 174 aaKnown RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 NEDD4P46934 1319 aa5.46□□□□□ -1.54
HDAC9-224ENST00000483142 POLR2AP24928 1970 aaKnown RBP5.46□□□□□ -1.54
HDAC9-224ENST00000483142 IGKV6D-41A0A0C4DH26 115 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 CLRN2A0PK11 232 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 DDTLA6NHG4 134 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-224ENST00000483142 UNCXA6NJT0 531 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 SLC27A2O14975 620 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 SEC24BO95487 1268 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 FGAP02671 866 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 HLA-DOAP06340 250 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 TDO2P48775 406 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 CACNB3P54284 484 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 FKBP1BP68106 108 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 KRT32Q14532 448 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 RASA3Q14644 834 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 CREB3L3Q68CJ9 461 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 STOX1Q6ZVD7 989 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 TTC6Q86TZ1 520 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 CDAN1Q8IWY9 1227 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 MB21D2Q8IYB1 491 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-224ENST00000483142 FBXL16Q8N461 479 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 RBM46Q8TBY0 533 aaKnown RBP5.45□□□□□ -1.54
HDAC9-224ENST00000483142 TGFBRAP1Q8WUH2 860 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 DDX12PQ92771 950 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 HOOK2Q96ED9 719 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 DDRGK1Q96HY6 314 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 AGXT2Q9BYV1 514 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 TM6SF1Q9BZW5 370 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 GINM1Q9NU53 330 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 SERPINB13Q9UIV8 391 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 ZNF112Q9UJU3 913 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 SYNPO2Q9UMS6 1093 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 TACC3Q9Y6A5 838 aa5.45□□□□□ -1.54
HDAC9-224ENST00000483142 MYH4Q9Y623 1939 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 USP17L12C9JPN9 530 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 ADM5C9JUS6 153 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 USP17L21D6R901 530 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 IRF6O14896 467 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 CYP2D6P10635 497 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 RASA1P20936 1047 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 MCCP23508 829 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 SHMT1P34896 483 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 USP5P45974 858 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 RBM5P52756 815 aaKnown RBP eCLIP5.44□□□□□ -1.54
HDAC9-224ENST00000483142 MAP2K5Q13163 448 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 PTGDRQ13258 359 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 IMMTQ16891 758 aaKnown RBP5.44□□□□□ -1.54
HDAC9-224ENST00000483142 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 RNF20Q5VTR2 975 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 DCAF15Q66K64 600 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 KIAA1211Q6ZU35 1233 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 CDC37L1Q7L3B6 337 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 SULF1Q8IWU6 871 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 AMOTL1Q8IY63 956 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.44□□□□□ -1.54
HDAC9-224ENST00000483142 CDCA5Q96FF9 252 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 CSRNP1Q96S65 589 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 KIF2CQ99661 725 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 TMEM39BQ9GZU3 492 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 DEFB129Q9H1M3 183 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 RNF41Q9H4P4 317 aaPredicted RBP5.44□□□□□ -1.54
HDAC9-224ENST00000483142 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 VEZTQ9HBM0 779 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 MCM9Q9NXL9 1143 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 PI4KBQ9UBF8 816 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms