RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 Q3C1V9 767 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 MAP3K21Q5TCX8 1036 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 NOL10Q9BSC4 688 aaKnown RBP9.09□□□□□ -0.95
CSDE1-206ENST00000483030 DHX36Q9H2U1 1008 aaKnown RBP9.09□□□□□ -0.95
CSDE1-206ENST00000483030 SNRKQ9NRH2 765 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 AATFQ9NY61 560 aaKnown RBP eCLIP9.09□□□□□ -0.95
CSDE1-206ENST00000483030 RBPJLQ9UBG7 517 aa9.09□□□□□ -0.95
CSDE1-206ENST00000483030 C19orf81C9J6K1 198 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 BAG3O95817 575 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 UQCRFS1P1P0C7P4 283 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 HERVK_113P62684 666 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 CACNB2Q08289 660 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 SHROOM1Q2M3G4 852 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 LRIT3Q3SXY7 679 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 NAA16Q6N069 864 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 GPR153Q6NV75 609 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 IFNLR1Q8IU57 520 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 FOXP4Q8IVH2 680 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 MAPKAPK5Q8IW41 473 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 CCAR1Q8IX12 1150 aaKnown RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 TDHQ8IZJ6 230 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 CRACR2BQ8N4Y2 399 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 ARHGAP45Q92619 1136 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 UBE2OQ9C0C9 1292 aaKnown RBP9.08□□□□□ -0.96
CSDE1-206ENST00000483030 PORCNQ9H237 461 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 DNAJC18Q9H819 358 aa9.08□□□□□ -0.96
CSDE1-206ENST00000483030 PFASO15067 1338 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 PNMA6EA0A0J9YXQ4 647 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 GDF11O95390 407 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 GNAI2P04899 355 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 PLCG2P16885 1265 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-206ENST00000483030 CCND3P30281 292 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-206ENST00000483030 MAPK4P31152 587 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 PPP4CP60510 307 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 CCL14Q16627 93 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 LHX8Q68G74 356 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 METTL16Q86W50 562 aaKnown RBP9.07□□□□□ -0.96
CSDE1-206ENST00000483030 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
CSDE1-206ENST00000483030 SOCS4Q8WXH5 440 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 USP6NLQ92738 828 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 PAGR1Q9BTK6 254 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 TRIM34Q9BYJ4 488 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 MTMR10Q9NXD2 777 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 SAP30BPQ9UHR5 308 aaKnown RBP9.07□□□□□ -0.96
CSDE1-206ENST00000483030 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 STXBP5LQ9Y2K9 1186 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 COL2A1P02458 1487 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-206ENST00000483030 MYH2Q9UKX2 1941 aa9.07□□□□□ -0.96
CSDE1-206ENST00000483030 MGAMO43451 1857 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 COL6A1P12109 1028 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 RGS2P41220 211 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 ERVK-24P63145 666 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
CSDE1-206ENST00000483030 LRRC26Q2I0M4 334 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 TTC39AQ5SRH9 613 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 MORN1Q5T089 497 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 GPR142Q7Z601 462 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 PLEKHH3Q7Z736 793 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 ADGRA1Q86SQ6 560 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 DBNDD2Q9BQY9 259 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 GINM1Q9NU53 330 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 ZBTB21Q9ULJ3 1066 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
CSDE1-206ENST00000483030 FLT1P17948 1338 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 DOCK2Q92608 1830 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 MYH13Q9UKX3 1938 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 LAMA3Q16787 3333 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 DOCK1Q14185 1865 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 GH2P01242 217 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-206ENST00000483030 DYNLL1P63167 89 aaKnown RBP9.05□□□□□ -0.96
CSDE1-206ENST00000483030 CCDC158Q5M9N0 1113 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-206ENST00000483030 EDC3Q96F86 508 aaKnown RBP9.05□□□□□ -0.96
CSDE1-206ENST00000483030 CWC22Q9HCG8 908 aaKnown RBP9.05□□□□□ -0.96
CSDE1-206ENST00000483030 TNNQ9UQP3 1299 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 DOCK3Q8IZD9 2030 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 PHIPQ8WWQ0 1821 aa9.05□□□□□ -0.96
CSDE1-206ENST00000483030 IPO8O15397 1037 aaKnown RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 HLA-DOAP06340 250 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 TRIM27P14373 513 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 CYP7A1P22680 504 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 ZAP70P43403 619 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 OS9Q13438 667 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 WDR78Q5VTH9 848 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 ATF7IPQ6VMQ6 1270 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms