RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PLCD1P51178 756 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 HMGCS2P54868 508 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
VARS-225ENST00000482996 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 SMCR8Q8TEV9 937 aaPredicted RBP16.72■□□□□ 0.27
VARS-225ENST00000482996 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 PTPRFP10586 1907 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 GNRH1P01148 92 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 GH2P01242 217 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.27
VARS-225ENST00000482996 ZFYP08048 801 aaPredicted RBP16.71■□□□□ 0.27
VARS-225ENST00000482996 MX1P20591 662 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 BACE1P56817 501 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 SH3D19Q5HYK7 790 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
VARS-225ENST00000482996 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
VARS-225ENST00000482996 MYH7P12883 1935 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 NAV1Q8NEY1 1877 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 PRKAB2O43741 272 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 BCRP11274 1271 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 JAG1P78504 1218 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 MTMR2Q13614 643 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
VARS-225ENST00000482996 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
VARS-225ENST00000482996 RNF113AO15541 343 aaKnown RBP16.69■□□□□ 0.26
VARS-225ENST00000482996 CHGBP05060 677 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 OSBPP22059 807 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 HOXD10P28358 340 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 SHMT1P34896 483 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 PSMC4P43686 418 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 PRMT2P55345 433 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 CAP1Q01518 475 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 GABPAQ06546 454 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
VARS-225ENST00000482996 EXOC6Q8TAG9 804 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 PI4K2BQ8TCG2 481 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 APPBP2Q92624 585 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 ARHGAP39Q9C0H5 1083 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 PUS7LQ9H0K6 701 aaKnown RBP16.69■□□□□ 0.26
VARS-225ENST00000482996 SWAP70Q9UH65 585 aa16.69■□□□□ 0.26
VARS-225ENST00000482996 SUPT16HQ9Y5B9 1047 aaKnown RBP16.69■□□□□ 0.26
VARS-225ENST00000482996 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
VARS-225ENST00000482996 RGS19P49795 217 aa16.68■□□□□ 0.26
VARS-225ENST00000482996 SOX10P56693 466 aa16.68■□□□□ 0.26
VARS-225ENST00000482996 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
VARS-225ENST00000482996 FEZ1Q99689 392 aa16.68■□□□□ 0.26
VARS-225ENST00000482996 DDX60LQ5H9U9 1706 aaKnown RBP16.67■□□□□ 0.26
VARS-225ENST00000482996 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
VARS-225ENST00000482996 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
VARS-225ENST00000482996 CYP2D6P10635 497 aa16.67■□□□□ 0.26
VARS-225ENST00000482996 GCLCP48506 637 aaPredicted RBP16.67■□□□□ 0.26
VARS-225ENST00000482996 FCGRTP55899 365 aa16.67■□□□□ 0.26
VARS-225ENST00000482996 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
VARS-225ENST00000482996 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
VARS-225ENST00000482996 STRBPQ96SI9 672 aaKnown RBP16.67■□□□□ 0.26
VARS-225ENST00000482996 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
VARS-225ENST00000482996 HTTP42858 3142 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 USP17L12C9JPN9 530 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 USP17L21D6R901 530 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 USP14P54578 494 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 MLLT1Q03111 559 aaPredicted RBP16.66■□□□□ 0.26
VARS-225ENST00000482996 SLC9C1Q4G0N8 1177 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 C12orf60Q5U649 245 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 OSBP2Q969R2 916 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
VARS-225ENST00000482996 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 PTCH2Q9Y6C5 1203 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
VARS-225ENST00000482996 GPAA1O43292 621 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 GNAT2P19087 354 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
VARS-225ENST00000482996 EVX2Q03828 476 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 GIMAP6Q6P9H5 292 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 SMC5Q8IY18 1101 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 ARPP21Q9UBL0 812 aaPredicted RBP16.65■□□□□ 0.26
VARS-225ENST00000482996 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
VARS-225ENST00000482996 CTGFP29279 349 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 PDE1AP54750 535 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 SEPT2Q15019 361 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 TMEM179Q6ZVK1 233 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 CCDC17Q96LX7 622 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 KIAA1683Q9H0B3 1180 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms