RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 JAG1P78504 1218 aa28.37■■■□□ 2.13
RHBDF1-208ENST00000482904 PABPC4Q13310 644 aaKnown RBP eCLIP28.37■■■□□ 2.13
RHBDF1-208ENST00000482904 UBE3CQ15386 1083 aa28.37■■■□□ 2.13
RHBDF1-208ENST00000482904 WDR18Q9BV38 432 aa28.37■■■□□ 2.13
RHBDF1-208ENST00000482904 TMOD4Q9NZQ9 345 aa28.37■■■□□ 2.13
RHBDF1-208ENST00000482904 GNRH1P01148 92 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 GH2P01242 217 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 RGS19P49795 217 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 PLCD1P51178 756 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 DDRGK1Q96HY6 314 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 DCP1AQ9NPI6 582 aaPredicted RBP28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 PTCH2Q9Y6C5 1203 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 LOC285556D6RIA3 1793 aa28.36■■■□□ 2.13
RHBDF1-208ENST00000482904 ERC2O15083 957 aa28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 FMNL1O95466 1100 aaPredicted RBP28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 CHGBP05060 677 aa28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 BCRP11274 1271 aa28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 PSMC4P43686 418 aa28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 TATDN1Q6P1N9 297 aa28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 TTC41PQ6P2S7 1318 aa28.35■■■□□ 2.13
RHBDF1-208ENST00000482904 ZSWIM8A7E2V4 1837 aa28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 BACE1P56817 501 aa28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 CERKLQ49MI3 558 aaPredicted RBP28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 SLC9C1Q4G0N8 1177 aa28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 SH3D19Q5HYK7 790 aa28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 AMOTL1Q8IY63 956 aa28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 KBTBD3Q8NAB2 608 aa28.34■■■□□ 2.13
RHBDF1-208ENST00000482904 PRKAB2O43741 272 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 OSBPP22059 807 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 FCGRTP55899 365 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 RAB3GAP1Q15042 981 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 ABCB5Q2M3G0 1257 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 TRIM47Q96LD4 638 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 FEZ1Q99689 392 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 CABP5Q9NP86 173 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 ATP8A2Q9NTI2 1148 aa28.33■■■□□ 2.13
RHBDF1-208ENST00000482904 USP17L10C9JJH3 530 aa28.32■■■□□ 2.12
RHBDF1-208ENST00000482904 HOXD10P28358 340 aa28.32■■■□□ 2.12
RHBDF1-208ENST00000482904 SHMT1P34896 483 aa28.32■■■□□ 2.12
RHBDF1-208ENST00000482904 SLC4A4Q9Y6R1 1079 aa28.32■■■□□ 2.12
RHBDF1-208ENST00000482904 MYH7P12883 1935 aa28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 C19orf81C9J6K1 198 aa28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 MX1P20591 662 aa28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 PRMT2P55345 433 aa28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 IRX3P78415 501 aaPredicted RBP28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 AAMPQ13685 434 aa28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 OTUD7AQ8TE49 926 aaPredicted RBP28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 GCC1Q96CN9 775 aa28.31■■■□□ 2.12
RHBDF1-208ENST00000482904 GLRX3O76003 335 aaKnown RBP28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 CYP2D6P10635 497 aa28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 CTGFP29279 349 aa28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 HDAC1Q13547 482 aaPredicted RBP28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 ANKRD45Q5TZF3 282 aa28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 NBPF11Q86T75 865 aa28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 ANKRD13CQ8N6S4 541 aa28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 ARMC5Q96C12 935 aa28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 PUS7LQ9H0K6 701 aaKnown RBP28.3■■■□□ 2.12
RHBDF1-208ENST00000482904 MYPNQ86TC9 1320 aa28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 MPHOSPH10O00566 681 aaKnown RBP28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 EVX2Q03828 476 aa28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 GABPAQ06546 454 aa28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 LRRFIP1Q32MZ4 808 aaKnown RBP28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 ASCC2Q9H1I8 757 aaPredicted RBP28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 SRRDQ9UH36 339 aa28.29■■■□□ 2.12
RHBDF1-208ENST00000482904 ZFYP08048 801 aaPredicted RBP28.28■■■□□ 2.12
RHBDF1-208ENST00000482904 GCLCP48506 637 aaPredicted RBP28.28■■■□□ 2.12
RHBDF1-208ENST00000482904 ZYXQ15942 572 aaKnown RBP28.28■■■□□ 2.12
RHBDF1-208ENST00000482904 RAET1EQ8TD07 263 aa28.28■■■□□ 2.12
RHBDF1-208ENST00000482904 APPBP2Q92624 585 aa28.28■■■□□ 2.12
RHBDF1-208ENST00000482904 SWAP70Q9UH65 585 aa28.28■■■□□ 2.12
RHBDF1-208ENST00000482904 RNF113AO15541 343 aaKnown RBP28.27■■■□□ 2.12
RHBDF1-208ENST00000482904 USP17L2Q6R6M4 530 aa28.27■■■□□ 2.12
RHBDF1-208ENST00000482904 PI4K2BQ8TCG2 481 aa28.27■■■□□ 2.12
RHBDF1-208ENST00000482904 TNPO2O14787 897 aaKnown RBP28.26■■■□□ 2.11
RHBDF1-208ENST00000482904 FAM110CQ1W6H9 321 aa28.26■■■□□ 2.11
RHBDF1-208ENST00000482904 SLC44A5Q8NCS7 719 aa28.26■■■□□ 2.11
RHBDF1-208ENST00000482904 DYNLL2Q96FJ2 89 aa28.26■■■□□ 2.11
RHBDF1-208ENST00000482904 FSD1Q9BTV5 496 aa28.26■■■□□ 2.11
RHBDF1-208ENST00000482904 SH3TC2Q8TF17 1288 aa28.25■■■□□ 2.11
RHBDF1-208ENST00000482904 ZNF333Q96JL9 665 aa28.25■■■□□ 2.11
RHBDF1-208ENST00000482904 CYP2D7A0A087X1C5 515 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 USP17L12C9JPN9 530 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 USP17L21D6R901 530 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 USP14P54578 494 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 PRKCZQ05513 592 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 EMILIN3Q9NT22 766 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 ARPP21Q9UBL0 812 aaPredicted RBP28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 TAOK2Q9UL54 1235 aa28.24■■■□□ 2.11
RHBDF1-208ENST00000482904 MYCP01106 439 aaPredicted RBP28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 SEPT2Q15019 361 aa28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 C12orf60Q5U649 245 aa28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 EXOC6Q8TAG9 804 aa28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 OSBP2Q969R2 916 aa28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 STRBPQ96SI9 672 aaKnown RBP28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 TMEM106CQ9BVX2 250 aa28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 RWDD1Q9H446 243 aaPredicted RBP28.23■■■□□ 2.11
RHBDF1-208ENST00000482904 HTTP42858 3142 aa28.22■■■□□ 2.11
RHBDF1-208ENST00000482904 GPAA1O43292 621 aa28.22■■■□□ 2.11
RHBDF1-208ENST00000482904 HOXA7P31268 230 aaPredicted RBP28.22■■■□□ 2.11
RHBDF1-208ENST00000482904 KIAA1683Q9H0B3 1180 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms