RNA–Protein interactions for RNA: ENST00000482542.5

SFXN5-215, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-215ENST00000482542 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
SFXN5-215ENST00000482542 GPRC5AQ8NFJ5 357 aa17.12■□□□□ 0.33
SFXN5-215ENST00000482542 EAF2Q96CJ1 260 aaPredicted RBP17.12■□□□□ 0.33
SFXN5-215ENST00000482542 CRISPLD2Q9H0B8 497 aa17.12■□□□□ 0.33
SFXN5-215ENST00000482542 GJD2Q9UKL4 321 aa17.12■□□□□ 0.33
SFXN5-215ENST00000482542 MS4A1P11836 297 aa17.11■□□□□ 0.33
SFXN5-215ENST00000482542 USP5P45974 858 aa17.11■□□□□ 0.33
SFXN5-215ENST00000482542 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
SFXN5-215ENST00000482542 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
SFXN5-215ENST00000482542 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
SFXN5-215ENST00000482542 ZBTB21Q9ULJ3 1066 aa17.11■□□□□ 0.33
SFXN5-215ENST00000482542 EVI5O60447 810 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 RLBP1P12271 317 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 HERVK_113P62684 666 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 DYNLL1P63167 89 aaKnown RBP17.1■□□□□ 0.33
SFXN5-215ENST00000482542 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 TTC6Q86TZ1 520 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
SFXN5-215ENST00000482542 TRMT44Q8IYL2 757 aaKnown RBP17.1■□□□□ 0.33
SFXN5-215ENST00000482542 SOCS4Q8WXH5 440 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■■■□ 19.8
SFXN5-215ENST00000482542 HMX1Q9NP08 348 aaPredicted RBP17.1■□□□□ 0.33
SFXN5-215ENST00000482542 TLR7Q9NYK1 1049 aaKnown RBP17.1■□□□□ 0.33
SFXN5-215ENST00000482542 SAP30BPQ9UHR5 308 aaKnown RBP17.1■□□□□ 0.33
SFXN5-215ENST00000482542 RPTORQ8N122 1335 aa17.1■□□□□ 0.33
SFXN5-215ENST00000482542 GDF11O95390 407 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 XRCC5P13010 732 aaKnown RBP17.09■□□□□ 0.33
SFXN5-215ENST00000482542 MAPK4P31152 587 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
SFXN5-215ENST00000482542 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 MAGEB6Q8N7X4 407 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 EHD4Q9H223 541 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 SERPINB13Q9UIV8 391 aa17.09■□□□□ 0.33
SFXN5-215ENST00000482542 JAG1P78504 1218 aa17.08■□□□□ 0.32
SFXN5-215ENST00000482542 TATDN1Q6P1N9 297 aa17.08■□□□□ 0.32
SFXN5-215ENST00000482542 AACSQ86V21 672 aa17.08■□□□□ 0.32
SFXN5-215ENST00000482542 MIGA1Q8NAN2 632 aa17.08■□□□□ 0.32
SFXN5-215ENST00000482542 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
SFXN5-215ENST00000482542 PHIPQ8WWQ0 1821 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 GH2P01242 217 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 USP14P54578 494 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
SFXN5-215ENST00000482542 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 CABP5Q9NP86 173 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 RBPJLQ9UBG7 517 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
SFXN5-215ENST00000482542 A0A1W2PPC1 479 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 ERVK-9P63128 1117 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 ERVK-24P63145 666 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 CERKLQ49MI3 558 aaPredicted RBP17.06■□□□□ 0.32
SFXN5-215ENST00000482542 FEZ1Q99689 392 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 NBPF3Q9H094 633 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
SFXN5-215ENST00000482542 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
SFXN5-215ENST00000482542 CYP2B6P20813 491 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 CCNA1P78396 465 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 ABCB5Q2M3G0 1257 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 RPAP2Q8IXW5 612 aaPredicted RBP17.05■□□□□ 0.32
SFXN5-215ENST00000482542 MIER1Q8N108 512 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 CLASRPQ8N2M8 674 aaKnown RBP17.05■□□□□ 0.32
SFXN5-215ENST00000482542 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
SFXN5-215ENST00000482542 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
SFXN5-215ENST00000482542 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 CEP290O15078 2479 aa17.05■□□□□ 0.32
SFXN5-215ENST00000482542 PTPRFP10586 1907 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 HMMRO75330 724 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 RGS2P41220 211 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
SFXN5-215ENST00000482542 Q3C1V9 767 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 PLEKHH3Q7Z736 793 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
SFXN5-215ENST00000482542 TRIB2Q92519 343 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 CRNKL1Q9BZJ0 848 aaKnown RBP17.04■□□□□ 0.32
SFXN5-215ENST00000482542 KIAA1683Q9H0B3 1180 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
SFXN5-215ENST00000482542 MGAMO43451 1857 aa17.03■□□□□ 0.32
SFXN5-215ENST00000482542 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
SFXN5-215ENST00000482542 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
SFXN5-215ENST00000482542 SLC9C2Q5TAH2 1124 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms