RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 SLC12A7Q9Y666 1083 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-220ENST00000482507 TPM4P67936 248 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 MYL5Q02045 173 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 ELF2Q15723 593 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 CNBD1Q8NA66 436 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 NAPBQ9H115 298 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 CUTAO60888 179 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 MDM2Q00987 491 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 SSRP1Q08945 709 aaKnown RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 SYT10Q6XYQ8 523 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 CMTR1Q8N1G2 835 aaKnown RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 INTS13Q9NVM9 706 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 OGFRQ9NZT2 677 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 RGL2O15211 777 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 UBASH3AP57075 661 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 TRIM29Q14134 588 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 AKNAD1Q5T1N1 836 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
ATG4B-220ENST00000482507 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 MROH5Q6ZUA9 1318 aa17.1■□□□□ 0.33
ATG4B-220ENST00000482507 MMP10P09238 476 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 IFNAR1P17181 557 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 KCNJ6P48051 423 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 CCDC152Q4G0S7 254 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 L2HGDHQ9H9P8 463 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-220ENST00000482507 ARAP2Q8WZ64 1704 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 FANCGO15287 622 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 SLU7O95391 586 aaKnown RBP17.09■□□□□ 0.33
ATG4B-220ENST00000482507 MMP1P03956 469 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
ATG4B-220ENST00000482507 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 CNNM3Q8NE01 707 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATG4B-220ENST00000482507 SCN7AQ01118 1682 aa17.09■□□□□ 0.33
ATG4B-220ENST00000482507 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.33
ATG4B-220ENST00000482507 SMIM22K7EJ46 135 aa17.08■□□□□ 0.33
ATG4B-220ENST00000482507 SERPINC1P01008 464 aa17.08■□□□□ 0.33
ATG4B-220ENST00000482507 PRR29P0C7W0 189 aa17.08■□□□□ 0.33
ATG4B-220ENST00000482507 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.33
ATG4B-220ENST00000482507 CCDC93Q567U6 631 aa17.08■□□□□ 0.33
ATG4B-220ENST00000482507 DIS3L2Q8IYB7 885 aaKnown RBP17.08■□□□□ 0.33
ATG4B-220ENST00000482507 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.33
ATG4B-220ENST00000482507 TMX1Q9H3N1 280 aa17.08■□□□□ 0.33
ATG4B-220ENST00000482507 DOCK2Q92608 1830 aa17.08■□□□□ 0.32
ATG4B-220ENST00000482507 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-220ENST00000482507 IGSF3O75054 1194 aa17.08■□□□□ 0.32
ATG4B-220ENST00000482507 BCAMP50895 628 aa17.08■□□□□ 0.32
ATG4B-220ENST00000482507 MAP3K12Q12852 859 aa17.08■□□□□ 0.32
ATG4B-220ENST00000482507 HSP90AA4PQ58FG1 418 aa17.08■□□□□ 0.32
ATG4B-220ENST00000482507 FBXO2Q9UK22 296 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-220ENST00000482507 UTRNP46939 3433 aa17.08■□□□□ 0.32
ATG4B-220ENST00000482507 NID2Q14112 1375 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 SLC5A1P13866 664 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 NR5A1Q13285 461 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 VSTM4Q8IW00 320 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-220ENST00000482507 SHISA4Q96DD7 197 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 GRAMD1CQ8IYS0 662 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 OXER1Q8TDS5 423 aa17.07■□□□□ 0.32
ATG4B-220ENST00000482507 CELF1Q92879 486 aaKnown RBP17.07■□□□□ 0.32
ATG4B-220ENST00000482507 CHD4Q14839 1912 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 WTIPA6NIX2 430 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-220ENST00000482507 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATG4B-220ENST00000482507 TMEM139Q8IV31 216 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 MAN1B1Q9UKM7 699 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 PCDHB6Q9Y5E3 794 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-220ENST00000482507 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
ATG4B-220ENST00000482507 RTN1Q16799 776 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 TRIM65Q6PJ69 517 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 USP49Q70CQ1 688 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 MED15Q96RN5 788 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms