RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 PANK1Q8TE04 598 aa23.61■■□□□ 1.37
CHPF2-203ENST00000482173 HTATIP2Q9BUP3 242 aa23.61■■□□□ 1.37
CHPF2-203ENST00000482173 EXOC6BQ9Y2D4 811 aa23.61■■□□□ 1.37
CHPF2-203ENST00000482173 FOCADQ5VW36 1801 aa23.61■■□□□ 1.37
CHPF2-203ENST00000482173 GDF11O95390 407 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 IRX3P78415 501 aaPredicted RBP23.6■■□□□ 1.37
CHPF2-203ENST00000482173 SHROOM1Q2M3G4 852 aaPredicted RBP23.6■■□□□ 1.37
CHPF2-203ENST00000482173 ERC1Q8IUD2 1116 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 MAGEB6Q8N7X4 407 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 MIGA1Q8NAN2 632 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 DEFB118Q96PH6 123 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 GINM1Q9NU53 330 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 NDUFB9Q9Y6M9 179 aa23.6■■□□□ 1.37
CHPF2-203ENST00000482173 C19orf81C9J6K1 198 aa23.59■■□□□ 1.37
CHPF2-203ENST00000482173 FARP2O94887 1054 aaPredicted RBP23.59■■□□□ 1.37
CHPF2-203ENST00000482173 TFRCP02786 760 aaKnown RBP23.59■■□□□ 1.37
CHPF2-203ENST00000482173 AACSQ86V21 672 aa23.59■■□□□ 1.37
CHPF2-203ENST00000482173 ZBTB21Q9ULJ3 1066 aa23.59■■□□□ 1.37
CHPF2-203ENST00000482173 USP17L10C9JJH3 530 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 HOXA7P31268 230 aaPredicted RBP23.58■■□□□ 1.37
CHPF2-203ENST00000482173 USP5P45974 858 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 MAP3K12Q12852 859 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 CERS3Q8IU89 383 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 P2RX7Q99572 595 aaKnown RBP23.58■■□□□ 1.37
CHPF2-203ENST00000482173 ANTXR1Q9H6X2 564 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 MORF4L1Q9UBU8 362 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 GJD2Q9UKL4 321 aa23.58■■□□□ 1.37
CHPF2-203ENST00000482173 FXR1P51114 621 aaKnown RBP eCLIP23.57■■□□□ 1.36
CHPF2-203ENST00000482173 PAK6Q9NQU5 681 aaPredicted RBP23.57■■□□□ 1.36
CHPF2-203ENST00000482173 ZBED9Q6R2W3 1325 aa23.57■■□□□ 1.36
CHPF2-203ENST00000482173 CAPN2P17655 700 aa23.56■■□□□ 1.36
CHPF2-203ENST00000482173 MYH1P12882 1939 aa23.55■■□□□ 1.36
CHPF2-203ENST00000482173 HERVK_113P62684 666 aa23.55■■□□□ 1.36
CHPF2-203ENST00000482173 HSP90AB4PQ58FF6 505 aa23.55■■□□□ 1.36
CHPF2-203ENST00000482173 CHRDL2Q6WN34 429 aa23.55■■□□□ 1.36
CHPF2-203ENST00000482173 IL1RAPL2Q9NP60 686 aa23.55■■□□□ 1.36
CHPF2-203ENST00000482173 NR2E3Q9Y5X4 410 aa23.55■■□□□ 1.36
CHPF2-203ENST00000482173 PEX10O60683 326 aa23.54■■□□□ 1.36
CHPF2-203ENST00000482173 GH2P01242 217 aa23.54■■□□□ 1.36
CHPF2-203ENST00000482173 HMGCRP04035 888 aa23.54■■□□□ 1.36
CHPF2-203ENST00000482173 TMED8Q6PL24 325 aaPredicted RBP23.54■■□□□ 1.36
CHPF2-203ENST00000482173 GPRC5AQ8NFJ5 357 aa23.54■■□□□ 1.36
CHPF2-203ENST00000482173 RHPN1Q8TCX5 695 aa23.54■■□□□ 1.36
CHPF2-203ENST00000482173 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.54■■□□□ 1.36
CHPF2-203ENST00000482173 EMILIN3Q9NT22 766 aa23.54■■□□□ 1.36
CHPF2-203ENST00000482173 MS4A1P11836 297 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 TATDN1Q6P1N9 297 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 USP17L2Q6R6M4 530 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 TTC6Q86TZ1 520 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 CRISPLD2Q9H0B8 497 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 TXNRD2Q9NNW7 524 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 SERPINB13Q9UIV8 391 aa23.53■■□□□ 1.36
CHPF2-203ENST00000482173 EHD4Q9H223 541 aa23.52■■□□□ 1.36
CHPF2-203ENST00000482173 RBPJLQ9UBG7 517 aa23.52■■□□□ 1.36
CHPF2-203ENST00000482173 TRIOBPQ9H2D6 2365 aa23.51■■□□□ 1.35
CHPF2-203ENST00000482173 APBB1O00213 710 aa23.51■■□□□ 1.35
CHPF2-203ENST00000482173 CYP2B6P20813 491 aa23.51■■□□□ 1.35
CHPF2-203ENST00000482173 TRIM32Q13049 653 aa23.51■■□□□ 1.35
CHPF2-203ENST00000482173 HMX1Q9NP08 348 aaPredicted RBP23.51■■□□□ 1.35
CHPF2-203ENST00000482173 TTF1Q15361 905 aaPredicted RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 CERKLQ49MI3 558 aaPredicted RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 CCAR1Q8IX12 1150 aaKnown RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 CLASRPQ8N2M8 674 aaKnown RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 PAWRQ96IZ0 340 aaKnown RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 FEZ1Q99689 392 aa23.5■■□□□ 1.35
CHPF2-203ENST00000482173 NUDT12Q9BQG2 462 aa23.5■■□□□ 1.35
CHPF2-203ENST00000482173 RIOK1Q9BRS2 568 aaKnown RBP23.5■■□□□ 1.35
CHPF2-203ENST00000482173 PAGR1Q9BTK6 254 aa23.5■■□□□ 1.35
CHPF2-203ENST00000482173 RPTORQ8N122 1335 aa23.5■■□□□ 1.35
CHPF2-203ENST00000482173 MAGEB6P1A0A0J9YX57 407 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 EVI5O60447 810 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 ERVK-9P63128 1117 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 ERVK-24P63145 666 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 RAB3GAP1Q15042 981 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 Q3C1V9 767 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 SLC9C2Q5TAH2 1124 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 RPAP2Q8IXW5 612 aaPredicted RBP23.49■■□□□ 1.35
CHPF2-203ENST00000482173 GTF3C2Q8WUA4 911 aaPredicted RBP23.49■■□□□ 1.35
CHPF2-203ENST00000482173 KIF1BPQ96EK5 621 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 RBM27Q9P2N5 1060 aaKnown RBP23.49■■□□□ 1.35
CHPF2-203ENST00000482173 PLXNB2O15031 1838 aa23.49■■□□□ 1.35
CHPF2-203ENST00000482173 POLR3DP05423 398 aaPredicted RBP23.48■■□□□ 1.35
CHPF2-203ENST00000482173 MAPK4P31152 587 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 PLCD1P51178 756 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 ABCB5Q2M3G0 1257 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 NECAB2Q7Z6G3 386 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 TRIB2Q92519 343 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 C12orf42Q96LP6 360 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 CABP5Q9NP86 173 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 COG6Q9Y2V7 657 aa23.48■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L15C9J2P7 530 aa23.47■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L13C9JLJ4 530 aa23.47■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L11C9JVI0 530 aa23.47■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L18D6R9N7 530 aa23.47■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L22D6RA61 530 aa23.47■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L17D6RBQ6 530 aa23.47■■□□□ 1.35
CHPF2-203ENST00000482173 USP17L19D6RCP7 530 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms