RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	GNL3L	Q9NVN8	582 aa	Known RBP	10.7	□□□□□ -0.7
UBE2F-222	ENST00000482096	CEP126	Q9P2H0	1117 aa		10.7	□□□□□ -0.7
UBE2F-222	ENST00000482096	BRCA2	P51587	3418 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	UBTFL1	P0CB47	393 aa	Predicted RBP	10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	MTFR1	Q15390	333 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	GPAT2	Q6NUI2	795 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	ZFPM1	Q8IX07	1006 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	TMUB1	Q9BVT8	246 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	SIL1	Q9H173	461 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	DENND2A	Q9ULE3	1009 aa		10.69	□□□□□ -0.7
UBE2F-222	ENST00000482096	PHF20L1	A8MW92	1017 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	RNF40	O75150	1001 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	ENTPD3	O75355	529 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	FMNL1	O95466	1100 aa	Predicted RBP	10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	BCR	P11274	1271 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	GRK4	P32298	578 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	IL15	P40933	162 aa	Predicted RBP	10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	PHKA1	P46020	1223 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	MAP3K10	Q02779	954 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	NKX2-3	Q8TAU0	364 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	RAET1E	Q8TD07	263 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	SHISA4	Q96DD7	197 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	PARK7	Q99497	189 aa	Known RBP	10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	IDI2	Q9BXS1	227 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	KDM4C	Q9H3R0	1056 aa		10.68	□□□□□ -0.7
UBE2F-222	ENST00000482096	ATRNL1	Q5VV63	1379 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	GAK	O14976	1311 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	MYPN	Q86TC9	1320 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096		H0YGN5	161 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	GJB1	P08034	283 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	CYP2C8	P10632	490 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	GJA8	P48165	433 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	RGS3	P49796	1198 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	CCDC102B	Q68D86	513 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	FASTKD5	Q7L8L6	764 aa	Known RBP	10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	UBE2Q1	Q7Z7E8	422 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	TRMT2A	Q8IZ69	625 aa	Known RBP	10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	SCYL3	Q8IZE3	742 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	ZGPAT	Q8N5A5	531 aa	Known RBP	10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	COPRS	Q9NQ92	184 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	SMC4	Q9NTJ3	1288 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	DAXX	Q9UER7	740 aa	Predicted RBP	10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	HDAC5	Q9UQL6	1122 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	ZHX2	Q9Y6X8	837 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096	ZSWIM8	A7E2V4	1837 aa		10.67	□□□□□ -0.7
UBE2F-222	ENST00000482096		A0A0G2JLL6	359 aa	Predicted RBP	10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	CCL5	P13501	91 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	PTPRA	P18433	802 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	ADORA1	P30542	326 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	FCGRT	P55899	365 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	PRKCZ	Q05513	592 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	SH3BP5L	Q7L8J4	393 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	ANKK1	Q8NFD2	765 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	PICK1	Q9NRD5	415 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	PA2G4	Q9UQ80	394 aa	Known RBP	10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	SLC45A1	Q9Y2W3	748 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	AFG3L2	Q9Y4W6	797 aa		10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	LRRFIP2	Q9Y608	721 aa	Known RBP	10.66	□□□□□ -0.7
UBE2F-222	ENST00000482096	RFX7	Q2KHR2	1363 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	PDS5A	Q29RF7	1337 aa	Known RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	DDTL	A6NHG4	134 aa	Predicted RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	DDX11L8	A8MPP1	907 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	CTNND1	O60716	968 aa	Known RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	CT47B1	P0C2W7	299 aa	Predicted RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	MS4A1	P11836	297 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	TIMM10	P62072	90 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	UBXN2A	P68543	259 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	RASGRF1	Q13972	1273 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	SLF2	Q8IX21	1173 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	DPF3	Q92784	378 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	WNT2B	Q93097	391 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	LRCH3	Q96II8	777 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	API5	Q9BZZ5	524 aa	Known RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	RNF208	Q9H0X6	261 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	DDX4	Q9NQI0	724 aa	Known RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	BIN2	Q9UBW5	565 aa	Predicted RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	NOB1	Q9ULX3	412 aa	Known RBP	10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	GABRQ	Q9UN88	632 aa		10.65	□□□□□ -0.7
UBE2F-222	ENST00000482096	BTD	P43251	543 aa		10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	GADL1	Q6ZQY3	521 aa		10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	DZIP1	Q86YF9	867 aa	Known RBP	10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	KCTD12	Q96CX2	325 aa	Known RBP	10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	HTATIP2	Q9BUP3	242 aa		10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	ABCF2	Q9UG63	623 aa		10.64	□□□□□ -0.71
UBE2F-222	ENST00000482096	MROH7-TTC4	A0A0A0MT08	1334 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	GPR75-ASB3	A0A0A6YYF3	556 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096		A0A1B0GUL7	405 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	ADCY3	O60266	1144 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	SGPL1	O95470	568 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	SLURP2	P0DP57	97 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	CAPN2	P17655	700 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	SSTR3	P32745	418 aa	Predicted RBP	10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	FLT3LG	P49771	235 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	RHBDL3	P58872	404 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	IRF5	Q13568	498 aa		10.63	□□□□□ -0.71
UBE2F-222	ENST00000482096	U2AF1L4	Q8WU68	220 aa	Known RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms