RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 ZBTB21Q9ULJ3 1066 aa22.55■■□□□ 1.2
HSPG2-210ENST00000481644 TRIM17Q9Y577 477 aa22.55■■□□□ 1.2
HSPG2-210ENST00000481644 RNF113AO15541 343 aaKnown RBP22.54■■□□□ 1.2
HSPG2-210ENST00000481644 SHROOM1Q2M3G4 852 aaPredicted RBP22.54■■□□□ 1.2
HSPG2-210ENST00000481644 LRRFIP1Q32MZ4 808 aaKnown RBP22.54■■□□□ 1.2
HSPG2-210ENST00000481644 SMC5Q8IY18 1101 aa22.54■■□□□ 1.2
HSPG2-210ENST00000481644 APPBP2Q92624 585 aa22.54■■□□□ 1.2
HSPG2-210ENST00000481644 DDRGK1Q96HY6 314 aa22.54■■□□□ 1.2
HSPG2-210ENST00000481644 SLC4A4Q9Y6R1 1079 aa22.54■■□□□ 1.2
HSPG2-210ENST00000481644 MYH8P13535 1937 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 IGHDP01880 384 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 FBXO46Q6PJ61 603 aaPredicted RBP22.53■■□□□ 1.2
HSPG2-210ENST00000481644 OTOP1Q7RTM1 612 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 PROCA1Q8NCQ7 364 aaPredicted RBP22.53■■□□□ 1.2
HSPG2-210ENST00000481644 WDR18Q9BV38 432 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 LNPKQ9C0E8 428 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 CPA4Q9UI42 421 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 AGTPBP1Q9UPW5 1226 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 SLC45A1Q9Y2W3 748 aa22.53■■□□□ 1.2
HSPG2-210ENST00000481644 GH2P01242 217 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 CYP2C8P10632 490 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 CYP2D6P10635 497 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 SHMT1P34896 483 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 HMGCS2P54868 508 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 IRX6P78412 446 aaPredicted RBP22.52■■□□□ 1.2
HSPG2-210ENST00000481644 EVX2Q03828 476 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 GABPAQ06546 454 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 CERKLQ49MI3 558 aaPredicted RBP22.52■■□□□ 1.2
HSPG2-210ENST00000481644 AMOTL1Q8IY63 956 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 FSD1Q9BTV5 496 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 EFCC1Q9HA90 598 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 STAP2Q9UGK3 403 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 ADGRA2Q96PE1 1338 aa22.52■■□□□ 1.2
HSPG2-210ENST00000481644 PDE1AP54750 535 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 MTMR2Q13614 643 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 ARHGEF6Q15052 776 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 ABCB5Q2M3G0 1257 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 C17orf99Q6UX52 265 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 STRBPQ96SI9 672 aaKnown RBP22.51■■□□□ 1.19
HSPG2-210ENST00000481644 HPS5Q9UPZ3 1129 aa22.51■■□□□ 1.19
HSPG2-210ENST00000481644 ZSWIM8A7E2V4 1837 aa22.5■■□□□ 1.19
HSPG2-210ENST00000481644 CAP1Q01518 475 aa22.5■■□□□ 1.19
HSPG2-210ENST00000481644 KIF22Q14807 665 aa22.5■■□□□ 1.19
HSPG2-210ENST00000481644 SH3D19Q5HYK7 790 aa22.5■■□□□ 1.19
HSPG2-210ENST00000481644 TREML2Q5T2D2 321 aa22.5■■□□□ 1.19
HSPG2-210ENST00000481644 BACE1P56817 501 aa22.49■■□□□ 1.19
HSPG2-210ENST00000481644 LACTBP83111 547 aaPredicted RBP22.49■■□□□ 1.19
HSPG2-210ENST00000481644 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
HSPG2-210ENST00000481644 CABP5Q9NP86 173 aa22.49■■□□□ 1.19
HSPG2-210ENST00000481644 TMOD4Q9NZQ9 345 aa22.49■■□□□ 1.19
HSPG2-210ENST00000481644 SWAP70Q9UH65 585 aa22.49■■□□□ 1.19
HSPG2-210ENST00000481644 PNMA3Q9UL41 463 aa22.49■■□□□ 1.19
HSPG2-210ENST00000481644 C19orf81C9J6K1 198 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 USP17L10C9JJH3 530 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 USP17L12C9JPN9 530 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 USP17L21D6R901 530 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 GPAA1O43292 621 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 PABPC4Q13310 644 aaKnown RBP eCLIP22.48■■□□□ 1.192e-6■■□□□ 13
HSPG2-210ENST00000481644 C12orf60Q5U649 245 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
HSPG2-210ENST00000481644 TAOK2Q9UL54 1235 aa22.48■■□□□ 1.19
HSPG2-210ENST00000481644 CYP2D7A0A087X1C5 515 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 M0R2C6 588 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 NUCB1Q02818 461 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 SLC44A5Q8NCS7 719 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 EVI5LQ96CN4 794 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 DYNLL2Q96FJ2 89 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 ARHGAP39Q9C0H5 1083 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 ARPP21Q9UBL0 812 aaPredicted RBP22.47■■□□□ 1.19
HSPG2-210ENST00000481644 PTPN22Q9Y2R2 807 aa22.47■■□□□ 1.19
HSPG2-210ENST00000481644 GSG1L2A8MUP6 293 aa22.46■■□□□ 1.19
HSPG2-210ENST00000481644 BCRP11274 1271 aa22.46■■□□□ 1.19
HSPG2-210ENST00000481644 GNAT2P19087 354 aa22.46■■□□□ 1.19
HSPG2-210ENST00000481644 CTR9Q6PD62 1173 aa22.46■■□□□ 1.19
HSPG2-210ENST00000481644 MPHOSPH10O00566 681 aaKnown RBP22.45■■□□□ 1.18
HSPG2-210ENST00000481644 ECM2O94769 699 aaPredicted RBP22.45■■□□□ 1.18
HSPG2-210ENST00000481644 OSBPP22059 807 aa22.45■■□□□ 1.18
HSPG2-210ENST00000481644 GIMAP6Q6P9H5 292 aa22.45■■□□□ 1.18
HSPG2-210ENST00000481644 SEC62Q99442 399 aaKnown RBP22.45■■□□□ 1.18
HSPG2-210ENST00000481644 FEZ1Q99689 392 aa22.45■■□□□ 1.18
HSPG2-210ENST00000481644 MGAMO43451 1857 aa22.45■■□□□ 1.18
HSPG2-210ENST00000481644 SMIM22K7EJ46 135 aa22.44■■□□□ 1.18
HSPG2-210ENST00000481644 SEPT2Q15019 361 aa22.44■■□□□ 1.18
HSPG2-210ENST00000481644 ZMYM1Q5SVZ6 1142 aa22.44■■□□□ 1.18
HSPG2-210ENST00000481644 USP17L2Q6R6M4 530 aa22.44■■□□□ 1.18
HSPG2-210ENST00000481644 C16orf86Q6ZW13 317 aa22.44■■□□□ 1.18
HSPG2-210ENST00000481644 GNRH1P01148 92 aa22.43■■□□□ 1.18
HSPG2-210ENST00000481644 APPP05067 770 aa22.43■■□□□ 1.18
HSPG2-210ENST00000481644 GUCY1A2P33402 732 aa22.43■■□□□ 1.18
HSPG2-210ENST00000481644 PSMC4P43686 418 aa22.43■■□□□ 1.18
HSPG2-210ENST00000481644 CDK8P49336 464 aa22.43■■□□□ 1.18
HSPG2-210ENST00000481644 ZYXQ15942 572 aaKnown RBP22.43■■□□□ 1.18
HSPG2-210ENST00000481644 SBK1Q52WX2 424 aa22.43■■□□□ 1.18
HSPG2-210ENST00000481644 ASCC2Q9H1I8 757 aaPredicted RBP22.43■■□□□ 1.18
HSPG2-210ENST00000481644 TDO2P48775 406 aa22.42■■□□□ 1.18
HSPG2-210ENST00000481644 IRX3P78415 501 aaPredicted RBP22.42■■□□□ 1.18
HSPG2-210ENST00000481644 TMEM179Q6ZVK1 233 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms