RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 MXD3Q9BW11 206 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 SLC24A3Q9HC58 644 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF70Q9UC06 446 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-208ENST00000481484 NAV1Q8NEY1 1877 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 RFX7Q2KHR2 1363 aa5.15□□□□□ -1.59
VPS13D-208ENST00000481484 DDX60LQ5H9U9 1706 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 CLRN2A0PK11 232 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 MOXD2PA6NHM9 499 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 SPDYE5A6NIY4 337 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 F8W031 263 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 GPR25O00155 361 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 IPO8O15397 1037 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 PLIN1O60240 522 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 CD2BP2O95400 341 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 MAP4K4O95819 1239 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 FDX1P10109 184 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 FGFR2P21802 821 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 GJA5P36382 358 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 IL15P40933 162 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 GYG1P46976 350 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 GTF2A2P52657 109 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 PDE4DQ08499 809 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 MTX1Q13505 466 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 RASA3Q14644 834 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 ATP2B3Q16720 1220 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 INTS3Q68E01 1043 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 DZIP1LQ8IYY4 767 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 TRMT2AQ8IZ69 625 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF296Q8WUU4 475 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 SYMPKQ92797 1274 aaKnown RBP5.14□□□□□ -1.59
VPS13D-208ENST00000481484 SLC10A4Q96EP9 437 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 USP44Q9H0E7 712 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 DENND2AQ9ULE3 1009 aa5.14□□□□□ -1.59
VPS13D-208ENST00000481484 MYH1P12882 1939 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 WTIPA6NIX2 430 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 GNRH1P01148 92 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 LDHBP07195 334 aaKnown RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 CETPP11597 493 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 NDUFV2P19404 249 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 RFX5P48382 616 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 PRMT2P55345 433 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 CHAF1AQ13111 956 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 PPIL2Q13356 520 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 MVPQ14764 893 aaKnown RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 DIXDC1Q155Q3 683 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 PRPF38BQ5VTL8 546 aaKnown RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 SPTY2D1Q68D10 685 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 TMED8Q6PL24 325 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 TRAF7Q6Q0C0 670 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 DLK2Q6UY11 383 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 MOB2Q70IA6 237 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 RETREG3Q86VR2 466 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 ERO1BQ86YB8 467 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 PRMT6Q96LA8 375 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 TEPSINQ96N21 525 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 ZNF341Q9BYN7 854 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 PUS3Q9BZE2 481 aaKnown RBP5.13□□□□□ -1.59
VPS13D-208ENST00000481484 COPRSQ9NQ92 184 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 PKD2L1Q9P0L9 805 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 CEP126Q9P2H0 1117 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 AKAP2Q9Y2D5 859 aa5.13□□□□□ -1.59
VPS13D-208ENST00000481484 RANBP2P49792 3224 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 SIPA1L1O43166 1804 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 MYO5AQ9Y4I1 1855 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 CUL9Q8IWT3 2517 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 CCL15-CCL14A0A0B4J2E2 113 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 SNAP23O00161 211 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 IGF2BP3O00425 579 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 RARSP54136 660 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 PPATQ06203 517 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 SNAPC2Q13487 334 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 VGLL4Q14135 290 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 KIF22Q14807 665 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 TAF1CQ15572 869 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 CCL15Q16663 113 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 LRRC24Q50LG9 513 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 NOL9Q5SY16 702 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 NBPF12Q5TAG4 269 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 PRAMEF18Q5VWM3 479 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 DZIP1Q86YF9 867 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 CERS3Q8IU89 383 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 ARMC5Q96C12 935 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 GCC1Q96CN9 775 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 OPTNQ96CV9 577 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 CLMNQ96JQ2 1002 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 WRNIP1Q96S55 665 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 PARK7Q99497 189 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 TBC1D2Q9BYX2 928 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 TMEM39BQ9GZU3 492 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 TDRD3Q9H7E2 651 aaKnown RBP5.12□□□□□ -1.59
VPS13D-208ENST00000481484 ZFYVE28Q9HCC9 887 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 JAG2Q9Y219 1238 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 GAKO14976 1311 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 ATRNL1Q5VV63 1379 aa5.12□□□□□ -1.59
VPS13D-208ENST00000481484 ZSWIM8A7E2V4 1837 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 TCP10L2B9ZVM9 353 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 ZBTB24O43167 697 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-208ENST00000481484 ENTPD3O75355 529 aa5.11□□□□□ -1.59
VPS13D-208ENST00000481484 USP2O75604 605 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms