RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
KDM4A-204ENST00000481296 GDF11O95390 407 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
KDM4A-204ENST00000481296 TSPY3P0CV98 308 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 TSPY8P0CW00 308 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 TATDN1Q6P1N9 297 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 ZNF444Q8N0Y2 327 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-204ENST00000481296 SMC1BQ8NDV3 1235 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 WRNIP1Q96S55 665 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 KIF2CQ99661 725 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 UPF3BQ9BZI7 483 aaKnown RBP11.32□□□□□ -0.6
KDM4A-204ENST00000481296 TM6SF1Q9BZW5 370 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 ZNF408Q9H9D4 720 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
KDM4A-204ENST00000481296 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
KDM4A-204ENST00000481296 PPP1R12BO60237 982 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-204ENST00000481296 CPA1P15085 419 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 AKR1B1P15121 316 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 MCM5P33992 734 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 TFAP4Q01664 338 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 MAP3K10Q02779 954 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 PRKG1Q13976 671 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 TTLL12Q14166 644 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-204ENST00000481296 RABEP1Q15276 862 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-204ENST00000481296 FAM47AQ5JRC9 791 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 CYB5R4Q7L1T6 521 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
KDM4A-204ENST00000481296 CCDC17Q96LX7 622 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 UBAC1Q9BSL1 405 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
KDM4A-204ENST00000481296 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 PRC1O43663 620 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 TOMM70O94826 608 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 ANTXR2P58335 489 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 SART3Q15020 963 aaKnown RBP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 SHROOM1Q2M3G4 852 aaPredicted RBP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 TMEM179Q6ZVK1 233 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 DHX32Q7L7V1 743 aaKnown RBP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 ARMC9Q7Z3E5 817 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 CABP5Q9NP86 173 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 ZBTB21Q9ULJ3 1066 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
KDM4A-204ENST00000481296 TNKSO95271 1327 aa11.3□□□□□ -0.6
KDM4A-204ENST00000481296 RBBP6Q7Z6E9 1792 aaKnown RBP11.29□□□□□ -0.6
KDM4A-204ENST00000481296 ERICH2A1L162 156 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
KDM4A-204ENST00000481296 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
KDM4A-204ENST00000481296 GH2P01242 217 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 ASNSP08243 561 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 INPP5BP32019 993 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 CAP2P40123 477 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
KDM4A-204ENST00000481296 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
KDM4A-204ENST00000481296 CLEC10AQ8IUN9 316 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 SCYL3Q8IZE3 742 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 ZKSCAN3Q9BRR0 538 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 LRRC2Q9BYS8 371 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
KDM4A-204ENST00000481296 ZSWIM5Q9P217 1185 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 ZNF112Q9UJU3 913 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 PASKQ96RG2 1323 aa11.29□□□□□ -0.6
KDM4A-204ENST00000481296 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
KDM4A-204ENST00000481296 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
KDM4A-204ENST00000481296 IFIT3O14879 490 aaKnown RBP11.28□□□□□ -0.6
KDM4A-204ENST00000481296 ST18O60284 1047 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 NMT2O60551 498 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
KDM4A-204ENST00000481296 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
KDM4A-204ENST00000481296 NEK4P51957 841 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 FKBP1BP68106 108 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 FGD1P98174 961 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 ICA1Q05084 483 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 VGLL4Q14135 290 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 WTAPQ15007 396 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 RAB3GAP1Q15042 981 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 Q6ZUG5 572 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
KDM4A-204ENST00000481296 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
KDM4A-204ENST00000481296 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms