RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 FOXB2Q5VYV0 432 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 TTLL5Q6EMB2 1281 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 RUFY4Q6ZNE9 571 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 MAATS1Q7Z4T9 603 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 TTC6Q86TZ1 520 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
LSM5-210ENST00000480956 EXOC2Q96KP1 924 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 LGR6Q9HBX8 967 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 IL2RAP01589 272 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 LMNB1P20700 586 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 RPIAP49247 311 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 GJA9P57773 515 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 RPS26P62854 115 aaKnown RBP9.82□□□□□ -0.84
LSM5-210ENST00000480956 TRIM32Q13049 653 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 HIF1AQ16665 826 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 PTPN21Q16825 1174 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 SLC10A6Q3KNW5 377 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
LSM5-210ENST00000480956 C1orf127Q8N9H9 656 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 COG1Q8WTW3 980 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 CLIP3Q96DZ5 547 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 CDC6Q99741 560 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 DHRS4Q9BTZ2 278 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 MAN1C1Q9NR34 630 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 DMTF1Q9Y222 760 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 NPTXRO95502 500 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 GRM3Q14832 879 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 C1QTNF12Q5T7M4 302 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 PKN3Q6P5Z2 889 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 PDXDC1Q6P996 788 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 REC114Q7Z4M0 266 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 EPN3Q9H201 632 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.82□□□□□ -0.84
LSM5-210ENST00000480956 KLHL11Q9NVR0 708 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 PNMA8BQ9ULN7 279 aaPredicted RBP9.82□□□□□ -0.84
LSM5-210ENST00000480956 USP20Q9Y2K6 914 aa9.82□□□□□ -0.84
LSM5-210ENST00000480956 A0A1W2PP55 124 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 UPK3BL1B0FP48 263 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 UPK3BL2E5RIL1 263 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 PMM2O15305 246 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 DHX16O60231 1041 aaKnown RBP9.81□□□□□ -0.84
LSM5-210ENST00000480956 CCT5P48643 541 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 PDE1CQ14123 709 aaPredicted RBP9.81□□□□□ -0.84
LSM5-210ENST00000480956 ARHGAP29Q52LW3 1261 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 LVRNQ6Q4G3 990 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 CMTR1Q8N1G2 835 aaKnown RBP9.81□□□□□ -0.84
LSM5-210ENST00000480956 PARD3BQ8TEW8 1205 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 PMEPA1Q969W9 287 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 IPO9Q96P70 1041 aaKnown RBP9.81□□□□□ -0.84
LSM5-210ENST00000480956 TTC1Q99614 292 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 MRPL4Q9BYD3 311 aaKnown RBP9.81□□□□□ -0.84
LSM5-210ENST00000480956 ABCB6Q9NP58 842 aa9.81□□□□□ -0.84
LSM5-210ENST00000480956 FRMPD2Q68DX3 1309 aaPredicted RBP9.81□□□□□ -0.84
LSM5-210ENST00000480956 ERC2O15083 957 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 POLD1P28340 1107 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 IDH3AP50213 366 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 DHX9Q08211 1270 aaKnown RBP9.8□□□□□ -0.84
LSM5-210ENST00000480956 SLC9A5Q14940 896 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 NBPF10Q6P3W6 841 aaKnown RBP9.8□□□□□ -0.84
LSM5-210ENST00000480956 MZT2AQ6P582 158 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 JARID2Q92833 1246 aaPredicted RBP9.8□□□□□ -0.84
LSM5-210ENST00000480956 SECISBP2LQ93073 1101 aaKnown RBP9.8□□□□□ -0.84
LSM5-210ENST00000480956 CDK5RAP3Q96JB5 506 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 TTC14Q96N46 770 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 MIR1-1HGQ9H1L0 117 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 PKD2L1Q9P0L9 805 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 PGAP2Q9UHJ9 254 aa9.8□□□□□ -0.84
LSM5-210ENST00000480956 FAM221AA4D161 298 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 FAM83GA6ND36 823 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 F5H423 210 aaPredicted RBP9.79□□□□□ -0.84
LSM5-210ENST00000480956 RHOBTB3O94955 611 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 PF4V1P10720 104 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 TNFAIP3P21580 790 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 NEK4P51957 841 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 SH3BP2P78314 561 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 NCAPHQ15003 741 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 SRLQ86TD4 932 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 ZNF598Q86UK7 904 aaKnown RBP9.79□□□□□ -0.84
LSM5-210ENST00000480956 FAM186BQ8IYM0 893 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 SETD1BQ9UPS6 1966 aaKnown RBP9.79□□□□□ -0.84
LSM5-210ENST00000480956 ABHD14A-ACY1A0A1B0GW23 586 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 hCG_1984214I3L0E3 225 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 SNUPNO95149 360 aaKnown RBP9.79□□□□□ -0.84
LSM5-210ENST00000480956 VEGFBP49765 207 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 ELF2Q15723 593 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 GPR158Q5T848 1215 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 DIEXFQ68CQ4 756 aaKnown RBP9.79□□□□□ -0.84
LSM5-210ENST00000480956 XRRA1Q6P2D8 792 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 ZNF295-AS1Q8N0V1 137 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 USP7Q93009 1102 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 ALDH8A1Q9H2A2 487 aaPredicted RBP9.79□□□□□ -0.84
LSM5-210ENST00000480956 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 TCF7L1Q9HCS4 588 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 LATS2Q9NRM7 1088 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 ZBTB21Q9ULJ3 1066 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 ANKRD6Q9Y2G4 727 aa9.79□□□□□ -0.84
LSM5-210ENST00000480956 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms