RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
CCM2-213ENST00000480658 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
CCM2-213ENST00000480658 SWAP70Q9UH65 585 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 ZBTB21Q9ULJ3 1066 aa13.83□□□□□ -0.2
CCM2-213ENST00000480658 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
CCM2-213ENST00000480658 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
CCM2-213ENST00000480658 GRK4P32298 578 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 MTMR2Q13614 643 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 UBE3CQ15386 1083 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
CCM2-213ENST00000480658 PXYLP1Q8TE99 480 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 ANTXR1Q9H6X2 564 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 ECHDC1Q9NTX5 307 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 ZNF532Q9HCE3 1301 aa13.82□□□□□ -0.2
CCM2-213ENST00000480658 DDX60LQ5H9U9 1706 aaKnown RBP13.81□□□□□ -0.2
CCM2-213ENST00000480658 NAV1Q8NEY1 1877 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 ERC2O15083 957 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 DYNLL1P63167 89 aaKnown RBP13.81□□□□□ -0.2
CCM2-213ENST00000480658 IRF5Q13568 498 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 PIAS4Q8N2W9 510 aaPredicted RBP13.81□□□□□ -0.2
CCM2-213ENST00000480658 GCC1Q96CN9 775 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 FEZ1Q99689 392 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 DCTPP1Q9H773 170 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
CCM2-213ENST00000480658 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
CCM2-213ENST00000480658 SIPA1L1O43166 1804 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
CCM2-213ENST00000480658 ADD2P35612 726 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 C12orf42Q96LP6 360 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 DNAJC18Q9H819 358 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 MCM9Q9NXL9 1143 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 TTC41PQ6P2S7 1318 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 MYH1P12882 1939 aa13.8□□□□□ -0.2
CCM2-213ENST00000480658 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 CCNA1P78396 465 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 PRKCZQ05513 592 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 CCAR1Q8IX12 1150 aaKnown RBP13.79□□□□□ -0.2
CCM2-213ENST00000480658 TRMT44Q8IYL2 757 aaKnown RBP13.79□□□□□ -0.2
CCM2-213ENST00000480658 ANKRD13CQ8N6S4 541 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
CCM2-213ENST00000480658 BOLA2Q9H3K6 86 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
CCM2-213ENST00000480658 HTTP42858 3142 aa13.79□□□□□ -0.2
CCM2-213ENST00000480658 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
CCM2-213ENST00000480658 GDF11O95390 407 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 GH2P01242 217 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 GNAT2P19087 354 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 MAPK4P31152 587 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
CCM2-213ENST00000480658 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 C20orf194Q5TEA3 1177 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 TMEM179Q6ZVK1 233 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 CCDC17Q96LX7 622 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 DCP1AQ9NPI6 582 aaPredicted RBP13.78□□□□□ -0.2
CCM2-213ENST00000480658 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
CCM2-213ENST00000480658 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
CCM2-213ENST00000480658 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
CCM2-213ENST00000480658 USP17L15C9J2P7 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L13C9JLJ4 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L11C9JVI0 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L18D6R9N7 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L22D6RA61 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L17D6RBQ6 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L19D6RCP7 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L20D6RJB6 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 MGAMO43451 1857 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 HERVK_113P62684 666 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 GABPAQ06546 454 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 USP17L24Q0WX57 530 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 GIMAP6Q6P9H5 292 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 TICAM2Q86XR7 235 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 LPAR1Q92633 364 aa13.77□□□□□ -0.21
CCM2-213ENST00000480658 ADCY3O60266 1144 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 MBD4O95243 580 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 GJB1P08034 283 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 FLT3LGP49771 235 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 CAP1Q01518 475 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
CCM2-213ENST00000480658 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 BCL11AQ9H165 835 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
CCM2-213ENST00000480658 CWC22Q9HCG8 908 aaKnown RBP13.76□□□□□ -0.21
CCM2-213ENST00000480658 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
CCM2-213ENST00000480658 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
CCM2-213ENST00000480658 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
CCM2-213ENST00000480658 SLURP2P0DP57 97 aa13.75□□□□□ -0.21
CCM2-213ENST00000480658 SHMT1P34896 483 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms