RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SEZ6Q53EL9 994 aa8.64□□□□□ -1.03
CALD1-219ENST00000480638 SLC6A19Q695T7 634 aa8.64□□□□□ -1.03
CALD1-219ENST00000480638 MCATQ8IVS2 390 aaKnown RBP8.64□□□□□ -1.03
CALD1-219ENST00000480638 MFSD2AQ8NA29 543 aa8.64□□□□□ -1.03
CALD1-219ENST00000480638 DPH2Q9BQC3 489 aaPredicted RBP8.64□□□□□ -1.03
CALD1-219ENST00000480638 REV1Q9UBZ9 1251 aa8.64□□□□□ -1.03
CALD1-219ENST00000480638 COBLO75128 1261 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 SLITRK5O94991 958 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 GRIK1P39086 918 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 CD97P48960 835 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 SLITRK4Q8IW52 837 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 NKD1Q969G9 470 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 MIPEPQ99797 713 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 LRRC4CQ9HCJ2 640 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.63□□□□□ -1.03
CALD1-219ENST00000480638 PCDHB14Q9Y5E9 798 aa8.63□□□□□ -1.03
CALD1-219ENST00000480638 CYP26A1O43174 497 aa8.62□□□□□ -1.03
CALD1-219ENST00000480638 SSTR4P31391 388 aa8.62□□□□□ -1.03
CALD1-219ENST00000480638 FAM13CQ8NE31 585 aa8.62□□□□□ -1.03
CALD1-219ENST00000480638 XAGE3Q8WTP9 111 aa8.62□□□□□ -1.03
CALD1-219ENST00000480638 TGIF2Q9GZN2 237 aa8.62□□□□□ -1.03
CALD1-219ENST00000480638 E9PSI1 815 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 DNAJA2O60884 412 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 ATE1O95260 518 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 MED26O95402 600 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 EOMESO95936 686 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 PAK2Q13177 524 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 LRP8Q14114 963 aa8.61□□□□□ -1.03
CALD1-219ENST00000480638 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
CALD1-219ENST00000480638 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 KIAA1324LA8MWY0 1029 aaPredicted RBP8.6□□□□□ -1.03
CALD1-219ENST00000480638 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 MCM4P33991 863 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 CLCQ05315 142 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 LETMD1Q6P1Q0 360 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 GK5Q6ZS86 529 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 FAM214BQ7L5A3 538 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 REXO1Q8N1G1 1221 aaKnown RBP8.6□□□□□ -1.03
CALD1-219ENST00000480638 EHMT1Q9H9B1 1298 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 KLHL3Q9UH77 587 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 U3KQE9 123 aa8.6□□□□□ -1.03
CALD1-219ENST00000480638 ZNF165P49910 485 aa8.59□□□□□ -1.03
CALD1-219ENST00000480638 YARSP54577 528 aaKnown RBP8.59□□□□□ -1.03
CALD1-219ENST00000480638 SLFN12Q8IYM2 578 aa8.59□□□□□ -1.03
CALD1-219ENST00000480638 FAM181AQ8N9Y4 354 aa8.59□□□□□ -1.03
CALD1-219ENST00000480638 HEXIM2Q96MH2 286 aaKnown RBP8.59□□□□□ -1.03
CALD1-219ENST00000480638 ACBD3Q9H3P7 528 aa8.59□□□□□ -1.03
CALD1-219ENST00000480638 IGSF5Q9NSI5 407 aa8.59□□□□□ -1.03
CALD1-219ENST00000480638 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
CALD1-219ENST00000480638 CHURC1-FNTBB4DL54 471 aa8.58□□□□□ -1.04
CALD1-219ENST00000480638 SPINK2P20155 84 aa8.58□□□□□ -1.04
CALD1-219ENST00000480638 ERCC5P28715 1186 aaPredicted RBP8.58□□□□□ -1.04
CALD1-219ENST00000480638 RIN3Q8TB24 985 aa8.58□□□□□ -1.04
CALD1-219ENST00000480638 CYB5D2Q8WUJ1 264 aa8.58□□□□□ -1.04
CALD1-219ENST00000480638 CCSER2Q9H7U1 834 aa8.58□□□□□ -1.04
CALD1-219ENST00000480638 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
CALD1-219ENST00000480638 ZC3H7BQ9UGR2 993 aaKnown RBP8.58□□□□□ -1.04
CALD1-219ENST00000480638 MAPK8IP1Q9UQF2 711 aa8.58□□□□□ -1.04
CALD1-219ENST00000480638 IGF2BP3O00425 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
CALD1-219ENST00000480638 OXCT1P55809 520 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 MLECQ14165 292 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 ARTNQ5T4W7 220 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 DTX1Q86Y01 620 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 GPRASP2Q96D09 838 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 MKNK2Q9HBH9 465 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 GMIPQ9P107 970 aa8.57□□□□□ -1.04
CALD1-219ENST00000480638 TPX2Q9ULW0 747 aaKnown RBP8.57□□□□□ -1.04
CALD1-219ENST00000480638 HYAL3O43820 417 aaPredicted RBP8.56□□□□□ -1.04
CALD1-219ENST00000480638 GJA8P48165 433 aa8.56□□□□□ -1.04
CALD1-219ENST00000480638 OVOS1Q6IE37 1185 aa8.56□□□□□ -1.04
CALD1-219ENST00000480638 ZNF746Q6NUN9 644 aaPredicted RBP8.56□□□□□ -1.04
CALD1-219ENST00000480638 ARHGAP27Q6ZUM4 889 aa8.56□□□□□ -1.04
CALD1-219ENST00000480638 PLD6Q8N2A8 252 aaKnown RBP8.56□□□□□ -1.04
CALD1-219ENST00000480638 DNAJB8Q8NHS0 232 aa8.56□□□□□ -1.04
CALD1-219ENST00000480638 RASGRP4Q8TDF6 673 aa8.56□□□□□ -1.04
CALD1-219ENST00000480638 PCMTD2Q9NV79 361 aa8.56□□□□□ -1.04
CALD1-219ENST00000480638 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 SLC22A31A6NKX4 558 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 CEACAM5P06731 702 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 ITIH2P19823 946 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 CDH24Q86UP0 819 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 PPP1R13LQ8WUF5 828 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
CALD1-219ENST00000480638 MEIS3P2A8K0S8 358 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 TNNI2P48788 182 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 ARSHQ5FYA8 562 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 SFRP5Q5T4F7 317 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 PHACTR4Q8IZ21 702 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 Q8N3U1 123 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 NETO1Q8TDF5 533 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 ZFP64Q9NPA5 681 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 GINM1Q9NU53 330 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 INPP5FQ9Y2H2 1132 aa8.54□□□□□ -1.04
CALD1-219ENST00000480638 ETV3P41162 512 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 COL9A2Q14055 689 aaPredicted RBP8.53□□□□□ -1.04
CALD1-219ENST00000480638 C22orf34Q6ZV56 151 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms