RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 JAG1P78504 1218 aa13.95□□□□□ -0.18
TTC28-206ENST00000480563 GORABQ5T7V8 394 aa13.95□□□□□ -0.18
TTC28-206ENST00000480563 FAM109BQ6ICB4 259 aaPredicted RBP13.95□□□□□ -0.18
TTC28-206ENST00000480563 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
TTC28-206ENST00000480563 SH3RF3Q8TEJ3 882 aaPredicted RBP13.95□□□□□ -0.18
TTC28-206ENST00000480563 PORCNQ9H237 461 aa13.95□□□□□ -0.18
TTC28-206ENST00000480563 DHX36Q9H2U1 1008 aaKnown RBP13.95□□□□□ -0.18
TTC28-206ENST00000480563 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
TTC28-206ENST00000480563 USP17L10C9JJH3 530 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 ERVK-9P63128 1117 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 ERVK-24P63145 666 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 SLFN5Q08AF3 891 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 MORN1Q5T089 497 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 GPR142Q7Z601 462 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 PLEKHH3Q7Z736 793 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 FOXP4Q8IVH2 680 aaPredicted RBP13.94□□□□□ -0.18
TTC28-206ENST00000480563 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 GUCD1Q96NT3 240 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 LBHD1Q9BQE6 289 aaPredicted RBP13.94□□□□□ -0.18
TTC28-206ENST00000480563 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
TTC28-206ENST00000480563 PAGR1Q9BTK6 254 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.94□□□□□ -0.18
TTC28-206ENST00000480563 PLXNB2O15031 1838 aa13.94□□□□□ -0.18
TTC28-206ENST00000480563 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
TTC28-206ENST00000480563 MEIS3Q99687 375 aa13.93□□□□□ -0.18
TTC28-206ENST00000480563 SENP6Q9GZR1 1112 aaPredicted RBP13.93□□□□□ -0.18
TTC28-206ENST00000480563 CWC22Q9HCG8 908 aaKnown RBP13.93□□□□□ -0.18
TTC28-206ENST00000480563 GDF11O95390 407 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 BAG3O95817 575 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 ARID4AP29374 1257 aaPredicted RBP13.92□□□□□ -0.18
TTC28-206ENST00000480563 MAP2K5Q13163 448 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
TTC28-206ENST00000480563 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 MAPKAPK5Q8IW41 473 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
TTC28-206ENST00000480563 GTF3C2Q8WUA4 911 aaPredicted RBP13.92□□□□□ -0.18
TTC28-206ENST00000480563 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 EDC3Q96F86 508 aaKnown RBP13.92□□□□□ -0.18
TTC28-206ENST00000480563 APBA2Q99767 749 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 TRIM34Q9BYJ4 488 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
TTC28-206ENST00000480563 DNAJC18Q9H819 358 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 EMILIN3Q9NT22 766 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 GINM1Q9NU53 330 aa13.92□□□□□ -0.18
TTC28-206ENST00000480563 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
TTC28-206ENST00000480563 MCAMP43121 646 aa13.91□□□□□ -0.18
TTC28-206ENST00000480563 MFSD14CQ5VZR4 134 aa13.91□□□□□ -0.18
TTC28-206ENST00000480563 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
TTC28-206ENST00000480563 AATFQ9NY61 560 aaKnown RBP eCLIP13.91□□□□□ -0.18
TTC28-206ENST00000480563 PALD1Q9ULE6 856 aa13.91□□□□□ -0.18
TTC28-206ENST00000480563 ZBTB21Q9ULJ3 1066 aa13.91□□□□□ -0.18
TTC28-206ENST00000480563 NDUFB9Q9Y6M9 179 aa13.91□□□□□ -0.18
TTC28-206ENST00000480563 UQCRFS1P1P0C7P4 283 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 PLCG2P16885 1265 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
TTC28-206ENST00000480563 PPP4CP60510 307 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 MTX1Q13505 466 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 NAA16Q6N069 864 aaPredicted RBP13.9□□□□□ -0.18
TTC28-206ENST00000480563 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 FLRT1Q9NZU1 646 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 DDX20Q9UHI6 824 aaKnown RBP13.9□□□□□ -0.18
TTC28-206ENST00000480563 RABGAP1Q9Y3P9 1069 aa13.9□□□□□ -0.18
TTC28-206ENST00000480563 UNC80Q8N2C7 3258 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 GNAI3P08754 354 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 CNGA1P29973 690 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 CCNA1P78396 465 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 ATP2B2Q01814 1243 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 WDR78Q5VTH9 848 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 LPAR1Q92633 364 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 SNRKQ9NRH2 765 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 ATAD5Q96QE3 1844 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 FLT1P17948 1338 aa13.89□□□□□ -0.19
TTC28-206ENST00000480563 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L15C9J2P7 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L13C9JLJ4 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L11C9JVI0 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L18D6R9N7 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L22D6RA61 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L17D6RBQ6 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L19D6RCP7 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L20D6RJB6 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 MSCO60682 206 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 CNMDO75829 334 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 PTPREP23469 700 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 USP17L24Q0WX57 530 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 ADGRA1Q86SQ6 560 aa13.88□□□□□ -0.19
TTC28-206ENST00000480563 CDX2Q99626 313 aaPredicted RBP13.88□□□□□ -0.19
TTC28-206ENST00000480563 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
TTC28-206ENST00000480563 DNM1LO00429 736 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 GH2P01242 217 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 HLA-DOAP06340 250 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 HOXC6P09630 235 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 CYP2C19P33261 490 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 RTP1P59025 263 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
TTC28-206ENST00000480563 ZYXQ15942 572 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms