RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 ZNF444Q8N0Y2 327 aaPredicted RBP32.36■■■□□ 2.77
TNFRSF25-213ENST00000480393 MYH15Q9Y2K3 1946 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 NMT2O60551 498 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 ZNF445P59923 1031 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 CCDC178Q5BJE1 867 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 ATL3Q6DD88 541 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 KCNQ5Q9NR82 932 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 RBM28Q9NW13 759 aaKnown RBP32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 ECM29Q5VYK3 1845 aa32.35■■■□□ 2.77
TNFRSF25-213ENST00000480393 USP17L3A6NCW0 530 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 USP17L4A6NCW7 530 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 DPEP1P16444 411 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 USP17L1Q7RTZ2 530 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 AIFM3Q96NN9 605 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 PPIP5K2O43314 1243 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 TSPY3P0CV98 308 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 TSPY8P0CW00 308 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 PICALMQ13492 652 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 USP40Q9NVE5 1235 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 TAOK2Q9UL54 1235 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 FOCADQ5VW36 1801 aa32.34■■■□□ 2.77
TNFRSF25-213ENST00000480393 GOLGA6L4A6NEF3 574 aa32.33■■■□□ 2.77
TNFRSF25-213ENST00000480393 DACT2Q5SW24 774 aa32.33■■■□□ 2.77
TNFRSF25-213ENST00000480393 C16orf86Q6ZW13 317 aa32.33■■■□□ 2.77
TNFRSF25-213ENST00000480393 BRAPQ7Z569 592 aa32.33■■■□□ 2.77
TNFRSF25-213ENST00000480393 RTKN2Q8IZC4 609 aa32.33■■■□□ 2.77
TNFRSF25-213ENST00000480393 CRACR2BQ8N4Y2 399 aaPredicted RBP32.32■■■□□ 2.76
TNFRSF25-213ENST00000480393 SLC44A5Q8NCS7 719 aa32.32■■■□□ 2.76
TNFRSF25-213ENST00000480393 GJB4Q9NTQ9 266 aa32.32■■■□□ 2.76
TNFRSF25-213ENST00000480393 MYH1P12882 1939 aa32.32■■■□□ 2.76
TNFRSF25-213ENST00000480393 CRKP46108 304 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 KRT40Q6A162 431 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 ZBTB7AO95365 584 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 DEXIO95424 95 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 KIAA0825Q8IV33 1275 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 CCDC82Q8N4S0 544 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 KAT14Q9H8E8 782 aa32.31■■■□□ 2.76
TNFRSF25-213ENST00000480393 ADAMTSL1Q8N6G6 1762 aa32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 RASA1P20936 1047 aa32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 CDK8P49336 464 aa32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 AKAP17AQ02040 695 aaKnown RBP32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 KIF23Q02241 960 aaPredicted RBP32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 CEBPZQ03701 1054 aaKnown RBP32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 TROAPQ12815 778 aa32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 GNL2Q13823 731 aaKnown RBP32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 NBPF11Q86T75 865 aa32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 CTCFLQ8NI51 663 aaPredicted RBP32.3■■■□□ 2.76
TNFRSF25-213ENST00000480393 POLD1P28340 1107 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 MRE11P49959 708 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 CCDC183Q5T5S1 534 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 GAS2L3Q86XJ1 694 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 DGKHQ86XP1 1220 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 CMTR1Q8N1G2 835 aaKnown RBP32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 SYCE3A1L190 88 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 TCP11L1Q9NUJ3 509 aa32.29■■■□□ 2.76
TNFRSF25-213ENST00000480393 KIF13BQ9NQT8 1826 aa32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 SCN9AQ15858 1988 aa32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 WDHD1O75717 1129 aaPredicted RBP32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 CDC42EP5Q6NZY7 148 aa32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 ZDHHC15Q96MV8 337 aa32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 PSMD1Q99460 953 aa32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 RNF26Q9BY78 433 aaPredicted RBP32.28■■■□□ 2.76
TNFRSF25-213ENST00000480393 KCNA3P22001 575 aa32.27■■■□□ 2.76
TNFRSF25-213ENST00000480393 RCSD1Q6JBY9 416 aa32.27■■■□□ 2.76
TNFRSF25-213ENST00000480393 USP28Q96RU2 1077 aa32.27■■■□□ 2.76
TNFRSF25-213ENST00000480393 MRIQ9BWK5 157 aa32.27■■■□□ 2.76
TNFRSF25-213ENST00000480393 GRPEL1Q9HAV7 217 aa32.27■■■□□ 2.76
TNFRSF25-213ENST00000480393 RBM5P52756 815 aaKnown RBP eCLIP32.26■■■□□ 2.76
TNFRSF25-213ENST00000480393 HDLBPQ00341 1268 aaKnown RBP32.26■■■□□ 2.76
TNFRSF25-213ENST00000480393 APOBEC3HQ6NTF7 200 aaKnown RBP32.26■■■□□ 2.76
TNFRSF25-213ENST00000480393 IL17RBQ9NRM6 502 aa32.26■■■□□ 2.76
TNFRSF25-213ENST00000480393 ZNF646O15015 1829 aaPredicted RBP32.26■■■□□ 2.75
TNFRSF25-213ENST00000480393 KIF28PB7ZC32 967 aa32.26■■■□□ 2.75
TNFRSF25-213ENST00000480393 UBE2Q2LH0YL09 131 aa32.26■■■□□ 2.75
TNFRSF25-213ENST00000480393 GUCY1A2P33402 732 aa32.26■■■□□ 2.75
TNFRSF25-213ENST00000480393 ANKS1AQ92625 1134 aa32.26■■■□□ 2.75
TNFRSF25-213ENST00000480393 DDX4Q9NQI0 724 aaKnown RBP32.26■■■□□ 2.75
TNFRSF25-213ENST00000480393 PLEKHA8P1O95397 391 aa32.25■■■□□ 2.75
TNFRSF25-213ENST00000480393 MYSM1Q5VVJ2 828 aa32.25■■■□□ 2.75
TNFRSF25-213ENST00000480393 TMTC3Q6ZXV5 915 aa32.25■■■□□ 2.75
TNFRSF25-213ENST00000480393 FTOQ9C0B1 505 aaKnown RBP eCLIP32.25■■■□□ 2.75
TNFRSF25-213ENST00000480393 ATF5Q9Y2D1 282 aaPredicted RBP32.25■■■□□ 2.75
TNFRSF25-213ENST00000480393 KIF5BP33176 963 aa32.24■■■□□ 2.75
TNFRSF25-213ENST00000480393 SAFBQ15424 915 aaKnown RBP eCLIP32.24■■■□□ 2.75
TNFRSF25-213ENST00000480393 SOGA3Q5TF21 947 aa32.24■■■□□ 2.75
TNFRSF25-213ENST00000480393 LRSAM1Q6UWE0 723 aa32.24■■■□□ 2.75
TNFRSF25-213ENST00000480393 MTFR1LQ9H019 292 aa32.24■■■□□ 2.75
TNFRSF25-213ENST00000480393 RCOR1Q9UKL0 485 aa32.24■■■□□ 2.75
TNFRSF25-213ENST00000480393 PNMA1Q8ND90 353 aa32.23■■■□□ 2.75
TNFRSF25-213ENST00000480393 BICD2Q8TD16 824 aa32.23■■■□□ 2.75
TNFRSF25-213ENST00000480393 OSBPL5Q9H0X9 879 aaPredicted RBP32.23■■■□□ 2.75
TNFRSF25-213ENST00000480393 TGFB2P61812 414 aa32.23■■■□□ 2.75
TNFRSF25-213ENST00000480393 PRPF3O43395 683 aaKnown RBP32.22■■■□□ 2.75
TNFRSF25-213ENST00000480393 LETM1O95202 739 aaPredicted RBP32.22■■■□□ 2.75
TNFRSF25-213ENST00000480393 LARGE2Q8N3Y3 721 aa32.22■■■□□ 2.75
TNFRSF25-213ENST00000480393 RTEL1Q9NZ71 1219 aa32.22■■■□□ 2.75
TNFRSF25-213ENST00000480393 SERPINA10Q9UK55 444 aa32.22■■■□□ 2.75
TNFRSF25-213ENST00000480393 YDJCA8MPS7 323 aa32.21■■■□□ 2.75
TNFRSF25-213ENST00000480393 HLA-DOAP06340 250 aa32.21■■■□□ 2.75
TNFRSF25-213ENST00000480393 XBP1P17861 261 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms