RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TEPSINQ96N21 525 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.6□□□□□ -1.19
HERC4-210ENST00000480158 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 ZMYM6O95789 1325 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 EPB41L2O43491 1005 aaKnown RBP7.59□□□□□ -1.19
HERC4-210ENST00000480158 NMT2O60551 498 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 FGD1P98174 961 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 TFAP4Q01664 338 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 FKBP1CQ5VVH2 108 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 BLOC1S2Q6QNY1 142 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 CYB5R4Q7L1T6 521 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 ZNF444Q8N0Y2 327 aaPredicted RBP7.59□□□□□ -1.19
HERC4-210ENST00000480158 NCOA7Q8NI08 942 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 STAG1Q8WVM7 1258 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 DNAJC18Q9H819 358 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 GPHNQ9NQX3 736 aaPredicted RBP7.59□□□□□ -1.19
HERC4-210ENST00000480158 ZSWIM5Q9P217 1185 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.59□□□□□ -1.19
HERC4-210ENST00000480158 ANAPC4Q9UJX5 808 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 TSPY2A6NKD2 308 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 GDF11O95390 407 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 YY1P25490 414 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 PSMA5P28066 241 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 ANAPC15P60006 121 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 KRT32Q14532 448 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 C16orf86Q6ZW13 317 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 CLEC10AQ8IUN9 316 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 SPDYE1Q8NFV5 336 aaPredicted RBP7.59□□□□□ -1.19
HERC4-210ENST00000480158 KCNB2Q92953 911 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 RNF41Q9H4P4 317 aaPredicted RBP7.59□□□□□ -1.19
HERC4-210ENST00000480158 CYP46A1Q9Y6A2 500 aa7.59□□□□□ -1.19
HERC4-210ENST00000480158 CDK5RAP2Q96SN8 1893 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 PRC1O43663 620 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 TSPY3P0CV98 308 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 TSPY8P0CW00 308 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 RASA1P20936 1047 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 SHMT1P34896 483 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 TSGA10IPQ3SY00 556 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 RUFY3Q7L099 469 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 ESR2Q92731 530 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 KRT23Q9C075 422 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 ZSWIM6Q9HCJ5 1215 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 PGAP2Q9UHJ9 254 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 NAP1L2Q9ULW6 460 aaPredicted RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 ECM29Q5VYK3 1845 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 NAV1Q8NEY1 1877 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 DTNBO60941 627 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 AKR1B1P15121 316 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 RPS6KB1P23443 525 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 ATP2B2Q01814 1243 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 GABPAQ06546 454 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 TTLL12Q14166 644 aaPredicted RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 RRP1BQ14684 758 aaKnown RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 CERKLQ49MI3 558 aaPredicted RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 Q6ZUG5 572 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 MOB2Q70IA6 237 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 CDC37L1Q7L3B6 337 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 DHX32Q7L7V1 743 aaKnown RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 RAB11FIP4Q86YS3 637 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 FOXP4Q8IVH2 680 aaPredicted RBP7.58□□□□□ -1.2
HERC4-210ENST00000480158 CNNM2Q9H8M5 875 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 SLC24A3Q9HC58 644 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 PDRG1Q9NUG6 133 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 MTMR7Q9Y216 660 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
HERC4-210ENST00000480158 ATRNL1Q5VV63 1379 aa7.58□□□□□ -1.2
HERC4-210ENST00000480158 IFIT3O14879 490 aaKnown RBP7.57□□□□□ -1.2
HERC4-210ENST00000480158 MCM5P33992 734 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 ANTXR2P58335 489 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 JAG1P78504 1218 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 RAB3GAP1Q15042 981 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 RABEP1Q15276 862 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
HERC4-210ENST00000480158 MB21D2Q8IYB1 491 aaPredicted RBP7.57□□□□□ -1.2
HERC4-210ENST00000480158 ZKSCAN4Q969J2 545 aaPredicted RBP7.57□□□□□ -1.2
HERC4-210ENST00000480158 CDCA5Q96FF9 252 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 UBAC1Q9BSL1 405 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 ZNF287Q9HBT7 754 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 SENP2Q9HC62 589 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 STX8Q9UNK0 236 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 MYH1P12882 1939 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 WDR90Q96KV7 1748 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 PITPNM2Q9BZ72 1349 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 RAD21O60216 631 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 SLC4A3P48751 1232 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 AK2P54819 239 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 SUPT20HL1Q3ZLR7 823 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 LDHDQ86WU2 507 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 BRF1Q92994 677 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 EHD4Q9H223 541 aa7.57□□□□□ -1.2
HERC4-210ENST00000480158 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
HERC4-210ENST00000480158 ROBO3Q96MS0 1386 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 ORC4O43929 436 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 GH2P01242 217 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 HMGB1P09429 215 aaKnown RBP7.56□□□□□ -1.2
HERC4-210ENST00000480158 FGRP09769 529 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 INPP5BP32019 993 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 EXOSC10Q01780 885 aaKnown RBP7.56□□□□□ -1.2
HERC4-210ENST00000480158 STK3Q13188 491 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms