RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CUL9Q8IWT3 2517 aa8.68□□□□□ -1.02
COL17A1-205ENST00000480127 POTEB2H3BUK9 544 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 SURF6O75683 361 aaKnown RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 BAG3O95817 575 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 MAP4K4O95819 1239 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 UQCRFS1P1P0C7P4 283 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 CCND3P30281 292 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 HOXA7P31268 230 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 MTMR2Q13614 643 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 LRRC26Q2I0M4 334 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 Q3C1V9 767 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 CRACR2BQ8N4Y2 399 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 SPATA5Q8NB90 893 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 GPRC5AQ8NFJ5 357 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 NSUN4Q96CB9 384 aaKnown RBP8.67□□□□□ -1.02
COL17A1-205ENST00000480127 GUCD1Q96NT3 240 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 WDR18Q9BV38 432 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 HMG20BQ9P0W2 317 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 RBPJLQ9UBG7 517 aa8.67□□□□□ -1.02
COL17A1-205ENST00000480127 BACE1P56817 501 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 HERVK_113P62684 666 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 IRX3P78415 501 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 CCL14Q16627 93 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 SHROOM1Q2M3G4 852 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 MORN1Q5T089 497 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 FAM109BQ6ICB4 259 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 TBC1D9Q6ZT07 1266 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 TMEM57Q8N5G2 664 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 SOCS4Q8WXH5 440 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 PORCNQ9H237 461 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 DNAJC18Q9H819 358 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 AS3MTQ9HBK9 375 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 SNRKQ9NRH2 765 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 HERC5Q9UII4 1024 aaKnown RBP8.66□□□□□ -1.02
COL17A1-205ENST00000480127 ATAD5Q96QE3 1844 aa8.66□□□□□ -1.02
COL17A1-205ENST00000480127 MS4A1P11836 297 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 PLCG2P16885 1265 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 ZKSCAN1P17029 563 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-205ENST00000480127 MAPK4P31152 587 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 NAA16Q6N069 864 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-205ENST00000480127 GPR142Q7Z601 462 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
COL17A1-205ENST00000480127 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.02
COL17A1-205ENST00000480127 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
COL17A1-205ENST00000480127 MIER1Q8N108 512 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 SH3RF3Q8TEJ3 882 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-205ENST00000480127 TMOD4Q9NZQ9 345 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 PI4KBQ9UBF8 816 aa8.65□□□□□ -1.02
COL17A1-205ENST00000480127 SIPA1L1O43166 1804 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 C19orf81C9J6K1 198 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 APBB1O00213 710 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 IDH1O75874 414 aaKnown RBP8.64□□□□□ -1.03
COL17A1-205ENST00000480127 ASNSP08243 561 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 ARID4AP29374 1257 aaPredicted RBP8.64□□□□□ -1.03
COL17A1-205ENST00000480127 RGS2P41220 211 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 ERVK-9P63128 1117 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 ERVK-24P63145 666 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 PDE3AQ14432 1141 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 PLEKHH3Q7Z736 793 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
COL17A1-205ENST00000480127 FLRT1Q9NZU1 646 aa8.64□□□□□ -1.03
COL17A1-205ENST00000480127 PNMA6EA0A0J9YXQ4 647 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 HMMRO75330 724 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 CNMDO75829 334 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 GDF11O95390 407 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 MCAMP43121 646 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 USP5P45974 858 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 MTX1Q13505 466 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 TNNI3KQ59H18 835 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 ERC1Q8IUD2 1116 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 FOXP4Q8IVH2 680 aaPredicted RBP8.63□□□□□ -1.03
COL17A1-205ENST00000480127 TGFBRAP1Q8WUH2 860 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 FAM161BQ96MY7 647 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 APBA2Q99767 749 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 PAGR1Q9BTK6 254 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 SENP6Q9GZR1 1112 aaPredicted RBP8.63□□□□□ -1.03
COL17A1-205ENST00000480127 EMILIN3Q9NT22 766 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 AATFQ9NY61 560 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL17A1-205ENST00000480127 TNNQ9UQP3 1299 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 FPGT-TNNI3KV9GXZ4 949 aa8.63□□□□□ -1.03
COL17A1-205ENST00000480127 FLT1P17948 1338 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 IGHA2P01877 340 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 PPP4CP60510 307 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 ADGRA1Q86SQ6 560 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 AACSQ86V21 672 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 MAPKAPK5Q8IW41 473 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms