RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 MCM3P25205 808 aa9.93□□□□□ -0.82
TTC3-216ENST00000479930 MCF2L2Q86YR7 1114 aa9.93□□□□□ -0.82
TTC3-216ENST00000479930 RPRD1BQ9NQG5 326 aaKnown RBP9.93□□□□□ -0.82
TTC3-216ENST00000479930 KRT83P78385 493 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 TWISTNBQ3B726 338 aaPredicted RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 RUNDC1Q96C34 613 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 PRAM1Q96QH2 718 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 PPP1R16BQ96T49 567 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 NDE1Q9NXR1 346 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 CALCOCO1Q9P1Z2 691 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 GTPBP10A4D1E9 387 aaKnown RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 RXRBP28702 533 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 SCNN1BP51168 640 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 LIN9Q5TKA1 542 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 KRT39Q6A163 491 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 CTAGE6Q86UF2 777 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 FBXO18Q8NFZ0 1043 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 GIMAP4Q9NUV9 329 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 CEP162Q5TB80 1403 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 PBXIP1Q96AQ6 731 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 F8W8V4 182 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 CCNB2O95067 398 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 HAND2P61296 217 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 DENND2CQ68D51 928 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 HYPKQ9NX55 129 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 MCM8Q9UJA3 840 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 ZNF197O14709 1029 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 TOMM20Q15388 145 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 PHKG1Q16816 387 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 KCNH4Q9UQ05 1017 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 TRAF5O00463 557 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 DKC1O60832 514 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■■■■ 30
TTC3-216ENST00000479930 PAMP19021 973 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 NFKBIAP25963 317 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 CCNA1P78396 465 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 PDZD4Q76G19 769 aaPredicted RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 ZSCAN30Q86W11 494 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 FAM186BQ8IYM0 893 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 SCHIP1Q9P0W5 487 aaPredicted RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 CCNL1Q9UK58 526 aaPredicted RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 TLR3O15455 904 aaKnown RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 PRKAR2BP31323 418 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 PRPSAP1Q14558 356 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 SKAP1Q86WV1 359 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 SPATA5Q8NB90 893 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 SLC10A4Q96EP9 437 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 MPHOSPH9Q99550 1183 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 MIS18AQ9NYP9 233 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 SELENONQ9NZV5 590 aa9.92□□□□□ -0.82
TTC3-216ENST00000479930 ORC3Q9UBD5 711 aaPredicted RBP9.92□□□□□ -0.82
TTC3-216ENST00000479930 HLA-DPA1P20036 260 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 EHHADHQ08426 723 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 SLC9C1Q4G0N8 1177 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 CAPN10Q9HC96 672 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 GSTA4O15217 222 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 TRAK2O60296 914 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 MIIPQ5JXC2 388 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 GAS2L3Q86XJ1 694 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 GPATCH11Q8N954 259 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 ECHDC1Q9NTX5 307 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 DBR1Q9UK59 544 aaKnown RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 TCP10L2B9ZVM9 353 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 GNGT2O14610 69 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 ERN1O75460 977 aaKnown RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 KRT32Q14532 448 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 CCDC8Q9H0W5 538 aaPredicted RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 ARHGDIAP52565 204 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 SNX1Q13596 522 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 RRAGBQ5VZM2 374 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 IFNA8P32881 189 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 DCUN1D2Q6PH85 259 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 LMBR1LQ6UX01 489 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 PLIN2Q99541 437 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 SKAP2O75563 359 aaPredicted RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 AFMP43652 599 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 MVPQ14764 893 aaKnown RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 FAM117BQ6P1L5 589 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 USP21Q9UK80 565 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 ASIC1P78348 528 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 RNF168Q8IYW5 571 aaPredicted RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 C1orf131Q8NDD1 294 aaKnown RBP9.91□□□□□ -0.82
TTC3-216ENST00000479930 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 CNPY2Q9Y2B0 182 aa9.91□□□□□ -0.82
TTC3-216ENST00000479930 TXNDC9O14530 226 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 URI1O94763 535 aaPredicted RBP9.9□□□□□ -0.82
TTC3-216ENST00000479930 SEL1L2Q5TEA6 688 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 SUGCTQ9HAC7 445 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 TESPA1A2RU30 521 aaPredicted RBP9.9□□□□□ -0.82
TTC3-216ENST00000479930 CTAGE8P0CG41 777 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 RRS1Q15050 365 aaKnown RBP9.9□□□□□ -0.82
TTC3-216ENST00000479930 CTAGE4Q8IX94 777 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 EXD1Q8NHP7 514 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 MYH10P35580 1976 aa9.9□□□□□ -0.82
TTC3-216ENST00000479930 AKR1B10O60218 316 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms