RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CIAO1O76071 339 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 NT5DC1Q5TFE4 455 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 OXER1Q8TDS5 423 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.53■■□□□ 1.36
COL13A1-208ENST00000479733 EPSTI1Q96J88 318 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 USP54Q70EL1 1684 aa23.52■■□□□ 1.36
COL13A1-208ENST00000479733 ARHGAP23Q9P227 1491 aa23.52■■□□□ 1.36
COL13A1-208ENST00000479733 ACTN4O43707 911 aaKnown RBP23.52■■□□□ 1.36
COL13A1-208ENST00000479733 RASGRP2Q7LDG7 609 aa23.52■■□□□ 1.36
COL13A1-208ENST00000479733 NAPGQ99747 312 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-208ENST00000479733 FAM204AQ9H8W3 233 aa23.52■■□□□ 1.36
COL13A1-208ENST00000479733 CABP5Q9NP86 173 aa23.52■■□□□ 1.36
COL13A1-208ENST00000479733 NOP2P46087 812 aaKnown RBP23.52■■□□□ 1.36
COL13A1-208ENST00000479733 SLF1Q9BQI6 1058 aa23.52■■□□□ 1.36
COL13A1-208ENST00000479733 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.52■■□□□ 1.36
COL13A1-208ENST00000479733 SYNRGQ9UMZ2 1314 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 MMP1P03956 469 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 GYPCP04921 128 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 TICAM2Q86XR7 235 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 IQUBQ8NA54 791 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 FAM89AQ96GI7 184 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 ZSWIM5Q9P217 1185 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 ADD3Q9UEY8 706 aaKnown RBP23.51■■□□□ 1.35
COL13A1-208ENST00000479733 SIPA1L3O60292 1781 aaPredicted RBP23.51■■□□□ 1.35
COL13A1-208ENST00000479733 SPATA1Q5VX52 437 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 DCAF5Q96JK2 942 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 WDR19Q8NEZ3 1342 aa23.51■■□□□ 1.35
COL13A1-208ENST00000479733 TRIM10Q9UDY6 481 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 A0A087X0B3 334 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 EIF3CLB5ME19 914 aaKnown RBP23.5■■□□□ 1.35
COL13A1-208ENST00000479733 RNF225M0QZC1 329 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-208ENST00000479733 ENC1O14682 589 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 FILIP1LQ4L180 1135 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 LRRC31Q6UY01 552 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 GOLGA6L1Q8N7Z2 621 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 EIF3CQ99613 913 aaKnown RBP23.5■■□□□ 1.35
COL13A1-208ENST00000479733 VPS16Q9H269 839 aa23.5■■□□□ 1.35
COL13A1-208ENST00000479733 FAM205CA6NFA0 338 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 ERCC5P28715 1186 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-208ENST00000479733 ERVK-24P63145 666 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 NAA15Q9BXJ9 866 aaKnown RBP23.49■■□□□ 1.35
COL13A1-208ENST00000479733 ADD2P35612 726 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 NUP133Q8WUM0 1156 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 NUP88Q99567 741 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-208ENST00000479733 EFCC1Q9HA90 598 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 PIH1D3Q9NQM4 214 aaKnown RBP23.49■■□□□ 1.35
COL13A1-208ENST00000479733 GUCA1BQ9UMX6 200 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 ZNF532Q9HCE3 1301 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 NOM1Q5C9Z4 860 aaKnown RBP23.49■■□□□ 1.35
COL13A1-208ENST00000479733 METTL24Q5JXM2 366 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 SYNE4Q8N205 404 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 TRIML1Q8N9V2 468 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 RIN2Q8WYP3 895 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-208ENST00000479733 TMEM87BQ96K49 555 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 HINFPQ9BQA5 517 aa23.49■■□□□ 1.35
COL13A1-208ENST00000479733 ZMYND10O75800 440 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 FMNL1O95466 1100 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-208ENST00000479733 RILPL1Q5EBL4 403 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 PACS2Q86VP3 889 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 HDAC6Q9UBN7 1215 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 TFR2Q9UP52 801 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 CHRNA2Q15822 529 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 KRT28Q7Z3Y7 464 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
COL13A1-208ENST00000479733 N4BP3O15049 544 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 TRIM22Q8IYM9 498 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 FAM71BQ8TC56 605 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 MYO6Q9UM54 1294 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 TTF2Q9UNY4 1162 aaKnown RBP23.47■■□□□ 1.35
COL13A1-208ENST00000479733 SRPRBQ9Y5M8 271 aaKnown RBP23.47■■□□□ 1.35
COL13A1-208ENST00000479733 hCG_1642624A0A1W2PR95 340 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 PIP4K2BP78356 416 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 CNGA4Q8IV77 575 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 CTNND2Q9UQB3 1225 aa23.47■■□□□ 1.35
COL13A1-208ENST00000479733 RNF40O75150 1001 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 AIDAQ96BJ3 306 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 C4AP0C0L4 1744 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 C4BP0C0L5 1744 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 PBX1P40424 430 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 KANK3Q6NY19 840 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 GBP3Q9H0R5 595 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 ARFGEF2Q9Y6D5 1785 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 SRGAP2O75044 1071 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 TTC31Q49AM3 519 aaPredicted RBP23.46■■□□□ 1.35
COL13A1-208ENST00000479733 ELOA2Q8IYF1 753 aaPredicted RBP23.46■■□□□ 1.35
COL13A1-208ENST00000479733 CAPZA3Q96KX2 299 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 BLZF1Q9H2G9 400 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 MEGF6O75095 1541 aa23.46■■□□□ 1.35
COL13A1-208ENST00000479733 ARHGAP25P42331 645 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 DPYDQ12882 1025 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 IFIT5Q13325 482 aaKnown RBP23.45■■□□□ 1.34
COL13A1-208ENST00000479733 CUL4BQ13620 913 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 WHAMMP3Q1A5X7 153 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 CABLES1Q8TDN4 633 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 TAB2Q9NYJ8 693 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 TACC3Q9Y6A5 838 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 IFNAR1P17181 557 aa23.45■■□□□ 1.34
COL13A1-208ENST00000479733 GTF2A1P52655 376 aaPredicted RBP23.45■■□□□ 1.34
COL13A1-208ENST00000479733 RTN1Q16799 776 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms