RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ATN1P54259 1190 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-212ENST00000479586 ERVK-9P63128 1117 aa21.48■■□□□ 1.03
HMGN1-212ENST00000479586 ERVK-24P63145 666 aa21.48■■□□□ 1.03
HMGN1-212ENST00000479586 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-212ENST00000479586 POTEEQ6S8J3 1075 aa21.48■■□□□ 1.03
HMGN1-212ENST00000479586 PLEKHH3Q7Z736 793 aa21.48■■□□□ 1.03
HMGN1-212ENST00000479586 PAGR1Q9BTK6 254 aa21.48■■□□□ 1.03
HMGN1-212ENST00000479586 HERC5Q9UII4 1024 aaKnown RBP21.48■■□□□ 1.03
HMGN1-212ENST00000479586 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-212ENST00000479586 PI16Q6UXB8 463 aa21.47■■□□□ 1.03
HMGN1-212ENST00000479586 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
HMGN1-212ENST00000479586 NSUN4Q96CB9 384 aaKnown RBP21.47■■□□□ 1.03
HMGN1-212ENST00000479586 A0A1B0GUL7 405 aa21.46■■□□□ 1.03
HMGN1-212ENST00000479586 MAP4K4O95819 1239 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-212ENST00000479586 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
HMGN1-212ENST00000479586 TEX11Q8IYF3 940 aa21.46■■□□□ 1.03
HMGN1-212ENST00000479586 XAGE2Q96GT9 111 aa21.46■■□□□ 1.03
HMGN1-212ENST00000479586 SEMA6BQ9H3T3 888 aa21.46■■□□□ 1.03
HMGN1-212ENST00000479586 MUC3AQ02505 3323 aa21.45■■□□□ 1.03
HMGN1-212ENST00000479586 ASNSP08243 561 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 GSTO1P78417 241 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 SHHQ15465 462 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 SH3RF3Q8TEJ3 882 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-212ENST00000479586 DNAJC18Q9H819 358 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 COPRSQ9NQ92 184 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 FLRT1Q9NZU1 646 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 HMG20BQ9P0W2 317 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 NDUFB9Q9Y6M9 179 aa21.45■■□□□ 1.02
HMGN1-212ENST00000479586 C19orf81C9J6K1 198 aa21.44■■□□□ 1.02
HMGN1-212ENST00000479586 LDHCP07864 332 aa21.44■■□□□ 1.02
HMGN1-212ENST00000479586 MAP2K5Q13163 448 aa21.44■■□□□ 1.02
HMGN1-212ENST00000479586 C9orf50Q5SZB4 431 aa21.44■■□□□ 1.02
HMGN1-212ENST00000479586 MYLIPQ8WY64 445 aa21.44■■□□□ 1.02
HMGN1-212ENST00000479586 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
HMGN1-212ENST00000479586 DDX20Q9UHI6 824 aaKnown RBP21.44■■□□□ 1.02
HMGN1-212ENST00000479586 USP17L10C9JJH3 530 aa21.43■■□□□ 1.02
HMGN1-212ENST00000479586 GDF11O95390 407 aa21.43■■□□□ 1.02
HMGN1-212ENST00000479586 RTP1P59025 263 aa21.43■■□□□ 1.02
HMGN1-212ENST00000479586 MVPQ14764 893 aaKnown RBP21.43■■□□□ 1.02
HMGN1-212ENST00000479586 CWC22Q9HCG8 908 aaKnown RBP21.43■■□□□ 1.02
HMGN1-212ENST00000479586 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
HMGN1-212ENST00000479586 PRKAG2Q9UGJ0 569 aa21.43■■□□□ 1.02
HMGN1-212ENST00000479586 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-212ENST00000479586 ZNF521Q96K83 1311 aa21.43■■□□□ 1.02
HMGN1-212ENST00000479586 TFCP2Q12800 502 aa21.42■■□□□ 1.02
HMGN1-212ENST00000479586 MFSD14CQ5VZR4 134 aa21.42■■□□□ 1.02
HMGN1-212ENST00000479586 SPATA5Q8NB90 893 aa21.42■■□□□ 1.02
HMGN1-212ENST00000479586 GTF3C2Q8WUA4 911 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-212ENST00000479586 EDC3Q96F86 508 aaKnown RBP21.42■■□□□ 1.02
HMGN1-212ENST00000479586 TTYH1Q9H313 450 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-212ENST00000479586 CNMDO75829 334 aa21.41■■□□□ 1.02
HMGN1-212ENST00000479586 CNGA1P29973 690 aa21.41■■□□□ 1.02
HMGN1-212ENST00000479586 LPAR1Q92633 364 aa21.41■■□□□ 1.02
HMGN1-212ENST00000479586 EMILIN3Q9NT22 766 aa21.41■■□□□ 1.02
HMGN1-212ENST00000479586 ATP11BQ9Y2G3 1177 aa21.41■■□□□ 1.02
HMGN1-212ENST00000479586 DNM1LO00429 736 aa21.4■■□□□ 1.02
HMGN1-212ENST00000479586 WDR78Q5VTH9 848 aa21.4■■□□□ 1.02
HMGN1-212ENST00000479586 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
HMGN1-212ENST00000479586 ZBTB21Q9ULJ3 1066 aa21.4■■□□□ 1.02
HMGN1-212ENST00000479586 RLFQ13129 1914 aa21.39■■□□□ 1.02
HMGN1-212ENST00000479586 FOSL2P15408 326 aa21.39■■□□□ 1.01
HMGN1-212ENST00000479586 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
HMGN1-212ENST00000479586 MAPKAPK5Q8IW41 473 aa21.39■■□□□ 1.01
HMGN1-212ENST00000479586 TRPV1Q8NER1 839 aa21.39■■□□□ 1.01
HMGN1-212ENST00000479586 NEUROD6Q96NK8 337 aa21.39■■□□□ 1.01
HMGN1-212ENST00000479586 PRDM5Q9NQX1 630 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-212ENST00000479586 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.01
HMGN1-212ENST00000479586 RABGAP1Q9Y3P9 1069 aa21.39■■□□□ 1.01
HMGN1-212ENST00000479586 MSCO60682 206 aa21.38■■□□□ 1.01
HMGN1-212ENST00000479586 CYP2C19P33261 490 aa21.38■■□□□ 1.01
HMGN1-212ENST00000479586 GJC2Q5T442 439 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-212ENST00000479586 USP17L2Q6R6M4 530 aa21.38■■□□□ 1.01
HMGN1-212ENST00000479586 CRACR2BQ8N4Y2 399 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-212ENST00000479586 NPLOC4Q8TAT6 608 aa21.38■■□□□ 1.01
HMGN1-212ENST00000479586 TGFBRAP1Q8WUH2 860 aa21.38■■□□□ 1.01
HMGN1-212ENST00000479586 AATFQ9NY61 560 aaKnown RBP eCLIP21.38■■□□□ 1.01
HMGN1-212ENST00000479586 CDK5RAP2Q96SN8 1893 aa21.38■■□□□ 1.01
HMGN1-212ENST00000479586 FLT1P17948 1338 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 GLRX3O76003 335 aaKnown RBP21.37■■□□□ 1.01
HMGN1-212ENST00000479586 PTPREP23469 700 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 SMAD3P84022 425 aaKnown RBP21.37■■□□□ 1.01
HMGN1-212ENST00000479586 ATP2B2Q01814 1243 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 ZYXQ15942 572 aaKnown RBP21.37■■□□□ 1.01
HMGN1-212ENST00000479586 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 BADQ92934 168 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 NOL10Q9BSC4 688 aaKnown RBP21.37■■□□□ 1.01
HMGN1-212ENST00000479586 TRIM34Q9BYJ4 488 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 LRP2BPQ9P2M1 347 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 PALD1Q9ULE6 856 aa21.37■■□□□ 1.01
HMGN1-212ENST00000479586 ARID4AP29374 1257 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-212ENST00000479586 MCAMP43121 646 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 CCNA1P78396 465 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 SLC39A5Q6ZMH5 540 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-212ENST00000479586 MEIS3Q99687 375 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 GINM1Q9NU53 330 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 FOCADQ5VW36 1801 aa21.36■■□□□ 1.01
HMGN1-212ENST00000479586 HOXC6P09630 235 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms