RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
SP140-210ENST00000479539 SLC4A8Q2Y0W8 1093 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 OTOFQ9HC10 1997 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
SP140-210ENST00000479539 GDF11O95390 407 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 CAP1Q01518 475 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 GADL1Q6ZQY3 521 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 CD99L2Q8TCZ2 262 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 APPBP2Q92624 585 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
SP140-210ENST00000479539 AGTPBP1Q9UPW5 1226 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 TRIM17Q9Y577 477 aa12.69□□□□□ -0.38
SP140-210ENST00000479539 ADGRA2Q96PE1 1338 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 GH2P01242 217 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 CYP2C8P10632 490 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 SHMT1P34896 483 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 PDE1AP54750 535 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 BACE1P56817 501 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 ARHGEF6Q15052 776 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 CERKLQ49MI3 558 aaPredicted RBP12.68□□□□□ -0.38
SP140-210ENST00000479539 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 CPA4Q9UI42 421 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 HPS5Q9UPZ3 1129 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 MAST2Q6P0Q8 1798 aa12.68□□□□□ -0.38
SP140-210ENST00000479539 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 CYP2D6P10635 497 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 BCRP11274 1271 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 HMGCS2P54868 508 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
SP140-210ENST00000479539 EVX2Q03828 476 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 TREML2Q5T2D2 321 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 C12orf60Q5U649 245 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 SLC4A4Q9Y6R1 1079 aa12.67□□□□□ -0.38
SP140-210ENST00000479539 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 USP17L12C9JPN9 530 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 USP17L21D6R901 530 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 NUCB1Q02818 461 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 MTMR2Q13614 643 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 ABCB5Q2M3G0 1257 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 GIMAP6Q6P9H5 292 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
SP140-210ENST00000479539 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 SWAP70Q9UH65 585 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
SP140-210ENST00000479539 GSG1L2A8MUP6 293 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 GPAA1O43292 621 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 GNRH1P01148 92 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
SP140-210ENST00000479539 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.38
SP140-210ENST00000479539 KIF22Q14807 665 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 SBK1Q52WX2 424 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 ZMYM1Q5SVZ6 1142 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 CTR9Q6PD62 1173 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 EVI5LQ96CN4 794 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 DYNLL2Q96FJ2 89 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 TMOD4Q9NZQ9 345 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 PNMA3Q9UL41 463 aa12.65□□□□□ -0.38
SP140-210ENST00000479539 DOCK2Q92608 1830 aa12.65□□□□□ -0.39
SP140-210ENST00000479539 LAMB1P07942 1786 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 M0R2C6 588 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 GNAT2P19087 354 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 CTGFP29279 349 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 CDK8P49336 464 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 RGS19P49795 217 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 C16orf86Q6ZW13 317 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 AMOTL1Q8IY63 956 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 OSBPL3Q9H4L5 887 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 ARPP21Q9UBL0 812 aaPredicted RBP12.64□□□□□ -0.39
SP140-210ENST00000479539 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
SP140-210ENST00000479539 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
SP140-210ENST00000479539 OSBPP22059 807 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 PSMC4P43686 418 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 USP14P54578 494 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms