RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 A0A1W2PQ27 194 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 A0A1W2PQ64 194 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 A0A1W2PQD8 194 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 ANKRD62A6NC57 917 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 NDUFA8P51970 172 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 MAP2K1Q02750 393 aaPredicted RBP16.15■□□□□ 0.18
COL20A1-206ENST00000479501 PNOCQ13519 176 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 EIF6P56537 245 aaKnown RBP16.15■□□□□ 0.18
COL20A1-206ENST00000479501 SYCP3Q8IZU3 236 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 IGSF22Q8N9C0 903 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL20A1-206ENST00000479501 XPO4Q9C0E2 1151 aaKnown RBP16.15■□□□□ 0.18
COL20A1-206ENST00000479501 SERTAD1Q9UHV2 236 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 ZDHHC9Q9Y397 364 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 ARID4AP29374 1257 aaPredicted RBP16.14■□□□□ 0.17
COL20A1-206ENST00000479501 IFFO1Q0D2I5 559 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 CLEC17AQ6ZS10 378 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 CTAGE15A4D2H0 777 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 CTAGE8P0CG41 777 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 NOP2P46087 812 aaKnown RBP16.14■□□□□ 0.17
COL20A1-206ENST00000479501 HLTFQ14527 1009 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL20A1-206ENST00000479501 CTAGE6Q86UF2 777 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 CTAGE4Q8IX94 777 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 STAMQ92783 540 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 VPS16Q9H269 839 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL20A1-206ENST00000479501 MRVI1Q9Y6F6 885 aa16.14■□□□□ 0.17
COL20A1-206ENST00000479501 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 TOB2Q14106 344 aaPredicted RBP16.13■□□□□ 0.17
COL20A1-206ENST00000479501 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
COL20A1-206ENST00000479501 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 CCDC42Q96M95 316 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 CTNND2Q9UQB3 1225 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 KRT83P78385 493 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 FTOQ9C0B1 505 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL20A1-206ENST00000479501 TNS3Q68CZ2 1445 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 CTAGE9A4FU28 777 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
COL20A1-206ENST00000479501 U2AF2P26368 475 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL20A1-206ENST00000479501 SLC39A14Q15043 492 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 NONOQ15233 471 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL20A1-206ENST00000479501 USP32Q8NFA0 1604 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 CD163L1Q9NR16 1453 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 TMEM87AQ8NBN3 555 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 LZTS2Q9BRK4 669 aa16.13■□□□□ 0.17
COL20A1-206ENST00000479501 SYNRGQ9UMZ2 1314 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 KRT86O43790 486 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 RESTQ13127 1097 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
COL20A1-206ENST00000479501 KRT25Q7Z3Z0 450 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 CLIC6Q96NY7 704 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 POLR3EQ9NVU0 708 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 TMCO5BA8MYB1 307 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 CCNT1O60563 726 aaKnown RBP16.12■□□□□ 0.17
COL20A1-206ENST00000479501 MCAMP43121 646 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 PDE4DQ08499 809 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 KIF5AQ12840 1032 aa16.12■□□□□ 0.17
COL20A1-206ENST00000479501 TXKP42681 527 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 GPHNQ9NQX3 736 aaPredicted RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 PRKAB2O43741 272 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 PPP1R2P41236 205 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 LRMPQ12912 555 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 ZNF569Q5MCW4 686 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 GUCA1BQ9UMX6 200 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 TBC1D8BQ0IIM8 1120 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
COL20A1-206ENST00000479501 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 VEZTQ9HBM0 779 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 ZNF804BA4D1E1 1349 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 PAK1Q13153 545 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 MRFAP1L1Q96HT8 127 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
COL20A1-206ENST00000479501 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 ZSWIM5Q9P217 1185 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 SPATA31D1Q6ZQQ2 1576 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 POTEJP0CG39 1038 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 KIF23Q02241 960 aaPredicted RBP16.1■□□□□ 0.17
COL20A1-206ENST00000479501 KRBA2Q6ZNG9 492 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 CEP112Q8N8E3 955 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 ATP8A2Q9NTI2 1148 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms