RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 USP17L5A8MUK1 530 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 GDF11O95390 407 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 GABPAQ06546 454 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 SBK1Q52WX2 424 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 FAM227BQ96M60 508 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 NAPBQ9H115 298 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 CABP5Q9NP86 173 aa24.49■■□□□ 1.51
VARS-224ENST00000479051 A0A0D9SFI3 127 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 HSPA8P11142 646 aaKnown RBP24.48■■□□□ 1.51
VARS-224ENST00000479051 GSPT1P15170 499 aaKnown RBP24.48■■□□□ 1.51
VARS-224ENST00000479051 SHMT1P34896 483 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 RRP1BQ14684 758 aaKnown RBP24.48■■□□□ 1.51
VARS-224ENST00000479051 CCDC129Q6ZRS4 1044 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 IFNL3Q8IZI9 196 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 ATAD5Q96QE3 1844 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 ZBTB21Q9ULJ3 1066 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 AFG3L2Q9Y4W6 797 aa24.48■■□□□ 1.51
VARS-224ENST00000479051 MINDY4BA8MYZ0 360 aa24.47■■□□□ 1.51
VARS-224ENST00000479051 ABCB5Q2M3G0 1257 aa24.47■■□□□ 1.51
VARS-224ENST00000479051 ZNF280CQ8ND82 737 aa24.47■■□□□ 1.51
VARS-224ENST00000479051 EPB41L4AQ9HCS5 686 aaPredicted RBP24.47■■□□□ 1.51
VARS-224ENST00000479051 PPP4R2Q9NY27 417 aa24.47■■□□□ 1.51
VARS-224ENST00000479051 CYP2D7A0A087X1C5 515 aa24.46■■□□□ 1.51
VARS-224ENST00000479051 TRIM75PA6NK02 468 aa24.46■■□□□ 1.51
VARS-224ENST00000479051 IGF2BP3O00425 579 aaKnown RBP eCLIP24.46■■□□□ 1.51
VARS-224ENST00000479051 GH2P01242 217 aa24.46■■□□□ 1.51
VARS-224ENST00000479051 LBX1P52954 281 aa24.46■■□□□ 1.51
VARS-224ENST00000479051 FASTKD5Q7L8L6 764 aaKnown RBP24.46■■□□□ 1.51
VARS-224ENST00000479051 DYNLL2Q96FJ2 89 aa24.46■■□□□ 1.51
VARS-224ENST00000479051 ZCCHC17Q9NP64 241 aaKnown RBP24.46■■□□□ 1.51
VARS-224ENST00000479051 TSKSQ9UJT2 592 aa24.46■■□□□ 1.51
VARS-224ENST00000479051 CCDC171Q6TFL3 1326 aa24.45■■□□□ 1.5
VARS-224ENST00000479051 CWC27Q6UX04 472 aaKnown RBP24.45■■□□□ 1.5
VARS-224ENST00000479051 C16orf86Q6ZW13 317 aa24.45■■□□□ 1.5
VARS-224ENST00000479051 PTPN18Q99952 460 aa24.45■■□□□ 1.5
VARS-224ENST00000479051 ZNF287Q9HBT7 754 aa24.45■■□□□ 1.5
VARS-224ENST00000479051 PRDM10Q9NQV6 1147 aa24.45■■□□□ 1.5
VARS-224ENST00000479051 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.45■■□□□ 1.5
VARS-224ENST00000479051 A0A0G2JLL6 359 aaPredicted RBP24.44■■□□□ 1.5
VARS-224ENST00000479051 MPHOSPH10O00566 681 aaKnown RBP24.44■■□□□ 1.5
VARS-224ENST00000479051 SLC3A2P08195 630 aaKnown RBP24.44■■□□□ 1.5
VARS-224ENST00000479051 SPP2Q13103 211 aa24.44■■□□□ 1.5
VARS-224ENST00000479051 PRRT2Q7Z6L0 340 aaPredicted RBP24.44■■□□□ 1.5
VARS-224ENST00000479051 CCDC84Q86UT8 332 aaPredicted RBP24.44■■□□□ 1.5
VARS-224ENST00000479051 SLC44A5Q8NCS7 719 aa24.44■■□□□ 1.5
VARS-224ENST00000479051 CCDC17Q96LX7 622 aa24.44■■□□□ 1.5
VARS-224ENST00000479051 WDR18Q9BV38 432 aa24.44■■□□□ 1.5
VARS-224ENST00000479051 CFHR5Q9BXR6 569 aa24.44■■□□□ 1.5
VARS-224ENST00000479051 CDK8P49336 464 aa24.43■■□□□ 1.5
VARS-224ENST00000479051 EVX2Q03828 476 aa24.43■■□□□ 1.5
VARS-224ENST00000479051 RAB3GAP1Q15042 981 aa24.43■■□□□ 1.5
VARS-224ENST00000479051 ANKRD23Q86SG2 305 aa24.43■■□□□ 1.5
VARS-224ENST00000479051 BTBD19C9JJ37 291 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 TBC1D8O95759 1140 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 GADL1Q6ZQY3 521 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 RUFY2Q8WXA3 655 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 MKNK2Q9HBH9 465 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 PHIPQ8WWQ0 1821 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 ROBO3Q96MS0 1386 aa24.42■■□□□ 1.5
VARS-224ENST00000479051 MYH8P13535 1937 aa24.41■■□□□ 1.5
VARS-224ENST00000479051 JAG1P78504 1218 aa24.41■■□□□ 1.5
VARS-224ENST00000479051 TAF1CQ15572 869 aaPredicted RBP24.41■■□□□ 1.5
VARS-224ENST00000479051 ALX1Q15699 326 aa24.41■■□□□ 1.5
VARS-224ENST00000479051 TMEM179Q6ZVK1 233 aa24.41■■□□□ 1.5
VARS-224ENST00000479051 ZNF589Q86UQ0 364 aaPredicted RBP24.41■■□□□ 1.5
VARS-224ENST00000479051 FAM43AQ8N2R8 423 aa24.41■■□□□ 1.5
VARS-224ENST00000479051 ZFYVE28Q9HCC9 887 aa24.41■■□□□ 1.5
VARS-224ENST00000479051 HSPD1P10809 573 aaKnown RBP24.4■■□□□ 1.5
VARS-224ENST00000479051 PDE4BQ07343 736 aa24.4■■□□□ 1.5
VARS-224ENST00000479051 PPARAQ07869 468 aa24.4■■□□□ 1.5
VARS-224ENST00000479051 SHROOM1Q2M3G4 852 aaPredicted RBP24.4■■□□□ 1.5
VARS-224ENST00000479051 VPS53Q5VIR6 699 aa24.4■■□□□ 1.5
VARS-224ENST00000479051 PROCA1Q8NCQ7 364 aaPredicted RBP24.4■■□□□ 1.5
VARS-224ENST00000479051 FEZ1Q99689 392 aa24.4■■□□□ 1.5
VARS-224ENST00000479051 TMOD4Q9NZQ9 345 aa24.4■■□□□ 1.5
VARS-224ENST00000479051 RAD50Q92878 1312 aa24.39■■□□□ 1.5
VARS-224ENST00000479051 C19orf81C9J6K1 198 aa24.39■■□□□ 1.49
VARS-224ENST00000479051 USP17L10C9JJH3 530 aa24.39■■□□□ 1.49
VARS-224ENST00000479051 NOM1Q5C9Z4 860 aaKnown RBP24.39■■□□□ 1.49
VARS-224ENST00000479051 ZMYM6O95789 1325 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 SMIM22K7EJ46 135 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 PDHXO00330 501 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 FOXP2O15409 715 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 HMGCS2P54868 508 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 BACE1P56817 501 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 PABPC4Q13310 644 aaKnown RBP eCLIP24.38■■□□□ 1.49
VARS-224ENST00000479051 CRHR2Q13324 411 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 MTMR2Q13614 643 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 MOGSQ13724 837 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 STK11IPQ8N1F8 1099 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 SLC45A1Q9Y2W3 748 aa24.38■■□□□ 1.49
VARS-224ENST00000479051 AKR1B1P15121 316 aa24.37■■□□□ 1.49
VARS-224ENST00000479051 SEPT2Q15019 361 aa24.37■■□□□ 1.49
VARS-224ENST00000479051 BMP2KLQ5H9B9 411 aa24.37■■□□□ 1.49
VARS-224ENST00000479051 SH3D19Q5HYK7 790 aa24.37■■□□□ 1.49
VARS-224ENST00000479051 ZNF444Q8N0Y2 327 aaPredicted RBP24.37■■□□□ 1.49
VARS-224ENST00000479051 PARK7Q99497 189 aaKnown RBP24.37■■□□□ 1.49
VARS-224ENST00000479051 AGTPBP1Q9UPW5 1226 aa24.37■■□□□ 1.49
VARS-224ENST00000479051 PTPRFP10586 1907 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms