RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 MGAMO43451 1857 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 C19orf81C9J6K1 198 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 MBD4O95243 580 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 CYP2C8P10632 490 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 SHMT1P34896 483 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 PLCD1P51178 756 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 BACE1P56817 501 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 PABPC4Q13310 644 aaKnown RBP eCLIP9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 KIF22Q14807 665 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 PI4K2BQ8TCG2 481 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 GCC1Q96CN9 775 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 C12orf42Q96LP6 360 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 ARMT1Q9H993 441 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 ATP8A2Q9NTI2 1148 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 CPA4Q9UI42 421 aa9.22□□□□□ -0.93
RN7SL549P-201ENST00000478997 KIAA0100Q14667 2235 aaKnown RBP9.21□□□□□ -0.93
RN7SL549P-201ENST00000478997 USP17L10C9JJH3 530 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 ERC2O15083 957 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 GLRX3O76003 335 aaKnown RBP9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 GDF11O95390 407 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 POLR3DP05423 398 aaPredicted RBP9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 CTGFP29279 349 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 HOXA7P31268 230 aaPredicted RBP9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 GCLCP48506 637 aaPredicted RBP9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 HMGCS2P54868 508 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 FAM110CQ1W6H9 321 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 TREML2Q5T2D2 321 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 SDR42E1Q8WUS8 393 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 ARHGAP39Q9C0H5 1083 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 BCL11AQ9H165 835 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 MCM9Q9NXL9 1143 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 SWAP70Q9UH65 585 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 MYH8P13535 1937 aa9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 BAZ2AQ9UIF9 1905 aaKnown RBP9.21□□□□□ -0.94
RN7SL549P-201ENST00000478997 GH2P01242 217 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 CHGBP05060 677 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 MX1P20591 662 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 FCGRTP55899 365 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 SOX10P56693 466 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 MTMR2Q13614 643 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 SHROOM1Q2M3G4 852 aaPredicted RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 CERKLQ49MI3 558 aaPredicted RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 GIMAP6Q6P9H5 292 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 SMCR8Q8TEV9 937 aaPredicted RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 APPBP2Q92624 585 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 ZNF333Q96JL9 665 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 TRIM47Q96LD4 638 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 PUS7LQ9H0K6 701 aaKnown RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 ASCC2Q9H1I8 757 aaPredicted RBP9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 TMOD4Q9NZQ9 345 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 SRRDQ9UH36 339 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 PTCH2Q9Y6C5 1203 aa9.2□□□□□ -0.94
RN7SL549P-201ENST00000478997 PDE4DIPQ5VU43 2346 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 RNF113AO15541 343 aaKnown RBP9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 PRKAB2O43741 272 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 OSBPP22059 807 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 HOXD10P28358 340 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 PSMC4P43686 418 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 ABCB5Q2M3G0 1257 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 C12orf60Q5U649 245 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 TSHZ3Q63HK5 1081 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 USP17L2Q6R6M4 530 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 TICAM2Q86XR7 235 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 SMC5Q8IY18 1101 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 OTUD7AQ8TE49 926 aaPredicted RBP9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 KIAA1683Q9H0B3 1180 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 CABP5Q9NP86 173 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 ARPP21Q9UBL0 812 aaPredicted RBP9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 MORF4L1Q9UBU8 362 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 STAP2Q9UGK3 403 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 ROBO3Q96MS0 1386 aa9.19□□□□□ -0.94
RN7SL549P-201ENST00000478997 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 CYP2D6P10635 497 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 GNAT2P19087 354 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 GUCY1A2P33402 732 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 USP14P54578 494 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 EVX2Q03828 476 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 SLC9C1Q4G0N8 1177 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 SBK1Q52WX2 424 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 TMEM179Q6ZVK1 233 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 C16orf86Q6ZW13 317 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 NBPF11Q86T75 865 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 MYPNQ86TC9 1320 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 AMOTL1Q8IY63 956 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 CCDC17Q96LX7 622 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 GREB1LQ9C091 1923 aaPredicted RBP9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 ZBTB47Q9UFB7 747 aaPredicted RBP9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 SLC4A4Q9Y6R1 1079 aa9.18□□□□□ -0.94
RN7SL549P-201ENST00000478997 GSG1L2A8MUP6 293 aa9.17□□□□□ -0.94
RN7SL549P-201ENST00000478997 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms