RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 MBD4O95243 580 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 GDF11O95390 407 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 GNRH1P01148 92 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 CYP2C8P10632 490 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 BCRP11274 1271 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 GABPAQ06546 454 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 KIF22Q14807 665 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 SLFNL1Q499Z3 407 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 MCM9Q9NXL9 1143 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 CPA4Q9UI42 421 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 MYH8P13535 1937 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 MGAMO43451 1857 aa19.31■□□□□ 0.68
CYTH3-206ENST00000478541 SALL3Q9BXA9 1300 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 ERC2O15083 957 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 CHGBP05060 677 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 POLR3DP05423 398 aaPredicted RBP19.3■□□□□ 0.68
CYTH3-206ENST00000478541 BACE1P56817 501 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 TREML2Q5T2D2 321 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 TSHZ3Q63HK5 1081 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 PI4K2BQ8TCG2 481 aa19.3■□□□□ 0.68
CYTH3-206ENST00000478541 C19orf81C9J6K1 198 aa19.29■□□□□ 0.68
CYTH3-206ENST00000478541 GLRX3O76003 335 aaKnown RBP19.29■□□□□ 0.68
CYTH3-206ENST00000478541 MX1P20591 662 aa19.29■□□□□ 0.68
CYTH3-206ENST00000478541 SHMT1P34896 483 aa19.29■□□□□ 0.68
CYTH3-206ENST00000478541 HMGCS2P54868 508 aa19.29■□□□□ 0.68
CYTH3-206ENST00000478541 PABPC4Q13310 644 aaKnown RBP eCLIP19.29■□□□□ 0.68
CYTH3-206ENST00000478541 SHROOM1Q2M3G4 852 aaPredicted RBP19.29■□□□□ 0.68
CYTH3-206ENST00000478541 PUS7LQ9H0K6 701 aaKnown RBP19.29■□□□□ 0.68
CYTH3-206ENST00000478541 PNMA3Q9UL41 463 aa19.29■□□□□ 0.68
CYTH3-206ENST00000478541 USP17L10C9JJH3 530 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 PRKAB2O43741 272 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 GH2P01242 217 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 ZFYP08048 801 aaPredicted RBP19.28■□□□□ 0.68
CYTH3-206ENST00000478541 PRMT2P55345 433 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 MTMR2Q13614 643 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
CYTH3-206ENST00000478541 ANKRD45Q5TZF3 282 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
CYTH3-206ENST00000478541 ARHGAP39Q9C0H5 1083 aa19.28■□□□□ 0.68
CYTH3-206ENST00000478541 ZBTB47Q9UFB7 747 aaPredicted RBP19.28■□□□□ 0.68
CYTH3-206ENST00000478541 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
CYTH3-206ENST00000478541 LRRFIP1Q32MZ4 808 aaKnown RBP19.27■□□□□ 0.68
CYTH3-206ENST00000478541 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.68
CYTH3-206ENST00000478541 CENPFP49454 3210 aa19.27■□□□□ 0.68
CYTH3-206ENST00000478541 RBBP6Q7Z6E9 1792 aaKnown RBP19.27■□□□□ 0.67
CYTH3-206ENST00000478541 CTGFP29279 349 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 ABCB5Q2M3G0 1257 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 APPBP2Q92624 585 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 DDRGK1Q96HY6 314 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 CABP5Q9NP86 173 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 SWAP70Q9UH65 585 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 SLC4A4Q9Y6R1 1079 aa19.26■□□□□ 0.67
CYTH3-206ENST00000478541 OSBPP22059 807 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
CYTH3-206ENST00000478541 PSMC4P43686 418 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 EVX2Q03828 476 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 C12orf60Q5U649 245 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 ARMC5Q96C12 935 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 STRBPQ96SI9 672 aaKnown RBP19.25■□□□□ 0.67
CYTH3-206ENST00000478541 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
CYTH3-206ENST00000478541 TMOD4Q9NZQ9 345 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 STAP2Q9UGK3 403 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 PTCH2Q9Y6C5 1203 aa19.25■□□□□ 0.67
CYTH3-206ENST00000478541 CYP2D6P10635 497 aa19.24■□□□□ 0.67
CYTH3-206ENST00000478541 GCLCP48506 637 aaPredicted RBP19.24■□□□□ 0.67
CYTH3-206ENST00000478541 SOX10P56693 466 aa19.24■□□□□ 0.67
CYTH3-206ENST00000478541 GIMAP6Q6P9H5 292 aa19.24■□□□□ 0.67
CYTH3-206ENST00000478541 AMOTL1Q8IY63 956 aa19.24■□□□□ 0.67
CYTH3-206ENST00000478541 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
CYTH3-206ENST00000478541 C12orf42Q96LP6 360 aa19.24■□□□□ 0.67
CYTH3-206ENST00000478541 ASCC2Q9H1I8 757 aaPredicted RBP19.24■□□□□ 0.67
CYTH3-206ENST00000478541 SUPT16HQ9Y5B9 1047 aaKnown RBP19.24■□□□□ 0.67
CYTH3-206ENST00000478541 USP17L12C9JPN9 530 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 USP17L21D6R901 530 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 HOXD10P28358 340 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 MLLT1Q03111 559 aaPredicted RBP19.23■□□□□ 0.67
CYTH3-206ENST00000478541 RAB3GAP1Q15042 981 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 FAM110CQ1W6H9 321 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 USP17L2Q6R6M4 530 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 EMILIN3Q9NT22 766 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 SRRDQ9UH36 339 aa19.23■□□□□ 0.67
CYTH3-206ENST00000478541 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
CYTH3-206ENST00000478541 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
CYTH3-206ENST00000478541 USP14P54578 494 aa19.22■□□□□ 0.67
CYTH3-206ENST00000478541 FCGRTP55899 365 aa19.22■□□□□ 0.67
CYTH3-206ENST00000478541 CTR9Q6PD62 1173 aa19.22■□□□□ 0.67
CYTH3-206ENST00000478541 DYNLL2Q96FJ2 89 aa19.22■□□□□ 0.67
CYTH3-206ENST00000478541 KIAA1683Q9H0B3 1180 aa19.22■□□□□ 0.67
CYTH3-206ENST00000478541 ARPP21Q9UBL0 812 aaPredicted RBP19.22■□□□□ 0.67
CYTH3-206ENST00000478541 GSG1L2A8MUP6 293 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 GPAA1O43292 621 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 GNAT2P19087 354 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 PDE1AP54750 535 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 SBK1Q52WX2 424 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 C16orf86Q6ZW13 317 aa19.21■□□□□ 0.67
CYTH3-206ENST00000478541 NBPF11Q86T75 865 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms