RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 RGL2O15211 777 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 DDAH1O94760 285 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 ZNF165P49910 485 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 ZNF174Q15697 407 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 CMTR1Q8N1G2 835 aaKnown RBP13.7□□□□□ -0.22
PCCB-214ENST00000478469 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
PCCB-214ENST00000478469 AS3MTQ9HBK9 375 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 KCNJ14Q9UNX9 436 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 NWD1Q149M9 1564 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 JAKMIP3Q5VZ66 844 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 FILIP1Q7Z7B0 1213 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 AFMP43652 599 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 STX1AQ16623 288 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 ANO1Q5XXA6 986 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 NAP1L4Q99733 375 aaKnown RBP13.7□□□□□ -0.22
PCCB-214ENST00000478469 TSG101Q99816 390 aa13.7□□□□□ -0.22
PCCB-214ENST00000478469 CAVIN2O95810 425 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 CDC37L1Q7L3B6 337 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
PCCB-214ENST00000478469 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 ZBED4O75132 1171 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCCB-214ENST00000478469 ADCY7P51828 1080 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 NAP1L1P55209 391 aaKnown RBP13.69□□□□□ -0.22
PCCB-214ENST00000478469 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 ISM2Q6H9L7 571 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 FOXP4Q8IVH2 680 aaPredicted RBP13.69□□□□□ -0.22
PCCB-214ENST00000478469 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
PCCB-214ENST00000478469 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 SHPRHQ149N8 1683 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 GOLGA8HP0CJ92 632 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 NONOQ15233 471 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCCB-214ENST00000478469 DHX58Q96C10 678 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 SCLT1Q96NL6 688 aa13.69□□□□□ -0.22
PCCB-214ENST00000478469 SUPT20HL1Q3ZLR7 823 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 FGFR1OPO95684 399 aaKnown RBP13.68□□□□□ -0.22
PCCB-214ENST00000478469 BRD1O95696 1058 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
PCCB-214ENST00000478469 NT5C2P49902 561 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 SCRN1Q12765 414 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 USH1GQ495M9 461 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
PCCB-214ENST00000478469 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 VWA3AA6NCI4 1184 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 CACNB3P54284 484 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 CCAR2Q8N163 923 aaKnown RBP13.68□□□□□ -0.22
PCCB-214ENST00000478469 REXO1Q8N1G1 1221 aaKnown RBP13.68□□□□□ -0.22
PCCB-214ENST00000478469 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
PCCB-214ENST00000478469 DCP1AQ9NPI6 582 aaPredicted RBP13.68□□□□□ -0.22
PCCB-214ENST00000478469 TTLL1O95922 423 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 LIFRP42702 1097 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 CASP7P55210 303 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 IGSF3O75054 1194 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 FBXO33Q7Z6M2 555 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
PCCB-214ENST00000478469 TBCAO75347 108 aaKnown RBP13.67□□□□□ -0.22
PCCB-214ENST00000478469 CDK8P49336 464 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
PCCB-214ENST00000478469 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
PCCB-214ENST00000478469 NSMFQ6X4W1 530 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 RMND1Q9NWS8 449 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 ROBO1Q9Y6N7 1651 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 CFBP00751 764 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 ALX1Q15699 326 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
PCCB-214ENST00000478469 SMCO2A6NFE2 343 aa13.66□□□□□ -0.22
PCCB-214ENST00000478469 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
PCCB-214ENST00000478469 SCG2P13521 617 aa13.66□□□□□ -0.22
PCCB-214ENST00000478469 NSUN4Q96CB9 384 aaKnown RBP13.66□□□□□ -0.22
PCCB-214ENST00000478469 SYCP1Q15431 976 aa13.66□□□□□ -0.22
PCCB-214ENST00000478469 EXOC1Q9NV70 894 aa13.66□□□□□ -0.22
PCCB-214ENST00000478469 GDF11O95390 407 aa13.66□□□□□ -0.22
PCCB-214ENST00000478469 CT47A1Q5JQC4 288 aaPredicted RBP13.66□□□□□ -0.22
PCCB-214ENST00000478469 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
PCCB-214ENST00000478469 DPEP1P16444 411 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 ZNRF3Q9ULT6 936 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 PDE4CQ08493 712 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 CCDC174Q6PII3 467 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 ASIC1P78348 528 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 LTN1O94822 1766 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 PNPLA7Q6ZV29 1317 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 TMEM232C9JQI7 657 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 CYP2D6P10635 497 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
PCCB-214ENST00000478469 HOMER2Q9NSB8 354 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms