RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
SYCP3-205ENST00000478238 HSPA12BQ96MM6 686 aa8.48□□□□□ -1.05
SYCP3-205ENST00000478238 SEMA3GQ9NS98 782 aa8.48□□□□□ -1.05
SYCP3-205ENST00000478238 MAP3K11Q16584 847 aa8.47□□□□□ -1.05
SYCP3-205ENST00000478238 PRAMEF13Q5VWM6 474 aa8.47□□□□□ -1.05
SYCP3-205ENST00000478238 LETMD1Q6P1Q0 360 aa8.47□□□□□ -1.05
SYCP3-205ENST00000478238 AGMOQ6ZNB7 445 aa8.47□□□□□ -1.05
SYCP3-205ENST00000478238 RIN3Q8TB24 985 aa8.47□□□□□ -1.05
SYCP3-205ENST00000478238 LMCD1Q9NZU5 365 aa8.47□□□□□ -1.05
SYCP3-205ENST00000478238 ANKRD33BA6NCL7 494 aa8.46□□□□□ -1.06
SYCP3-205ENST00000478238 GFRA2O00451 464 aa8.46□□□□□ -1.06
SYCP3-205ENST00000478238 FARP2O94887 1054 aaPredicted RBP8.46□□□□□ -1.06
SYCP3-205ENST00000478238 CST3P01034 146 aaPredicted RBP8.46□□□□□ -1.06
SYCP3-205ENST00000478238 LIG3P49916 1009 aa8.46□□□□□ -1.06
SYCP3-205ENST00000478238 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
SYCP3-205ENST00000478238 CDKAL1Q5VV42 579 aa8.46□□□□□ -1.06
SYCP3-205ENST00000478238 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.06
SYCP3-205ENST00000478238 CTNND2Q9UQB3 1225 aa8.46□□□□□ -1.06
SYCP3-205ENST00000478238 MEI1Q5TIA1 1274 aa8.45□□□□□ -1.06
SYCP3-205ENST00000478238 ZNF746Q6NUN9 644 aaPredicted RBP8.45□□□□□ -1.06
SYCP3-205ENST00000478238 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
SYCP3-205ENST00000478238 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
SYCP3-205ENST00000478238 CARS2Q9HA77 564 aaKnown RBP8.45□□□□□ -1.06
SYCP3-205ENST00000478238 TACC3Q9Y6A5 838 aa8.45□□□□□ -1.06
SYCP3-205ENST00000478238 CAPN6Q9Y6Q1 641 aa8.45□□□□□ -1.06
SYCP3-205ENST00000478238 H3BS24 57 aa8.44□□□□□ -1.06
SYCP3-205ENST00000478238 MIR1-1HGQ9H1L0 117 aa8.44□□□□□ -1.06
SYCP3-205ENST00000478238 ST14Q9Y5Y6 855 aa8.44□□□□□ -1.06
SYCP3-205ENST00000478238 CBX7O95931 251 aa8.43□□□□□ -1.06
SYCP3-205ENST00000478238 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
SYCP3-205ENST00000478238 ZNF124Q15973 351 aa8.43□□□□□ -1.06
SYCP3-205ENST00000478238 KCNMB1Q16558 191 aa8.43□□□□□ -1.06
SYCP3-205ENST00000478238 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
SYCP3-205ENST00000478238 NPAS4Q8IUM7 802 aa8.43□□□□□ -1.06
SYCP3-205ENST00000478238 PGRP06401 933 aa8.42□□□□□ -1.06
SYCP3-205ENST00000478238 MRPL41Q8IXM3 137 aaKnown RBP8.42□□□□□ -1.06
SYCP3-205ENST00000478238 DPH2Q9BQC3 489 aaPredicted RBP8.42□□□□□ -1.06
SYCP3-205ENST00000478238 GZF1Q9H116 711 aaPredicted RBP8.42□□□□□ -1.06
SYCP3-205ENST00000478238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.42□□□□□ -1.06
SYCP3-205ENST00000478238 TJP2Q9UDY2 1190 aa8.42□□□□□ -1.06
SYCP3-205ENST00000478238 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
SYCP3-205ENST00000478238 ZNF503-AS2A6NEH8 195 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 CYP7A1P22680 504 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 AFMP43652 599 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 FYB2Q5VWT5 728 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 THAP5Q7Z6K1 395 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 CDH24Q86UP0 819 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 COX4I2Q96KJ9 171 aa8.41□□□□□ -1.06
SYCP3-205ENST00000478238 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 RLBP1P12271 317 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 KIR3DL1P43629 444 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 TSNAXIP1Q2TAA8 658 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 SLC6A19Q695T7 634 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 KSR1Q8IVT5 923 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 FAM53CQ9NYF3 392 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 TLR6Q9Y2C9 796 aa8.4□□□□□ -1.06
SYCP3-205ENST00000478238 DAB2P98082 770 aa8.39□□□□□ -1.07
SYCP3-205ENST00000478238 RPL6Q02878 288 aaKnown RBP8.39□□□□□ -1.07
SYCP3-205ENST00000478238 PDE4BQ07343 736 aa8.39□□□□□ -1.07
SYCP3-205ENST00000478238 TNK2Q07912 1038 aa8.39□□□□□ -1.07
SYCP3-205ENST00000478238 MESP2Q0VG99 397 aa8.39□□□□□ -1.07
SYCP3-205ENST00000478238 PSMD2Q13200 908 aa8.39□□□□□ -1.07
SYCP3-205ENST00000478238 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
SYCP3-205ENST00000478238 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.38□□□□□ -1.07
SYCP3-205ENST00000478238 ST13P50502 369 aaKnown RBP8.38□□□□□ -1.07
SYCP3-205ENST00000478238 PKN1Q16512 942 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 MLANAQ16655 118 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 MCATQ8IVS2 390 aaKnown RBP8.38□□□□□ -1.07
SYCP3-205ENST00000478238 JARID2Q92833 1246 aaPredicted RBP8.38□□□□□ -1.07
SYCP3-205ENST00000478238 UBE2FQ969M7 185 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 LIN37Q96GY3 246 aaPredicted RBP8.38□□□□□ -1.07
SYCP3-205ENST00000478238 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 FAM84AQ96KN4 292 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 SLC38A3Q99624 504 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
SYCP3-205ENST00000478238 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 ADAM30Q9UKF2 790 aa8.38□□□□□ -1.07
SYCP3-205ENST00000478238 DBX1A6NMT0 343 aa8.37□□□□□ -1.07
SYCP3-205ENST00000478238 CTSHP09668 335 aa8.37□□□□□ -1.07
SYCP3-205ENST00000478238 GDNFP39905 211 aa8.37□□□□□ -1.07
SYCP3-205ENST00000478238 HOMEZQ8IX15 550 aa8.37□□□□□ -1.07
SYCP3-205ENST00000478238 PHC3Q8NDX5 983 aa8.37□□□□□ -1.07
SYCP3-205ENST00000478238 ACSF2Q96CM8 615 aaPredicted RBP8.37□□□□□ -1.07
SYCP3-205ENST00000478238 GLI1P08151 1106 aa8.36□□□□□ -1.07
SYCP3-205ENST00000478238 ETV3P41162 512 aa8.36□□□□□ -1.07
SYCP3-205ENST00000478238 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
SYCP3-205ENST00000478238 DNAJB8Q8NHS0 232 aa8.36□□□□□ -1.07
SYCP3-205ENST00000478238 PIWIL2Q8TC59 973 aaKnown RBP8.36□□□□□ -1.07
SYCP3-205ENST00000478238 FAM161BQ96MY7 647 aa8.36□□□□□ -1.07
SYCP3-205ENST00000478238 ALPK1Q96QP1 1244 aa8.36□□□□□ -1.07
SYCP3-205ENST00000478238 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
SYCP3-205ENST00000478238 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
SYCP3-205ENST00000478238 CCDC120Q96HB5 630 aa8.35□□□□□ -1.07
SYCP3-205ENST00000478238 CORINQ9Y5Q5 1042 aa8.35□□□□□ -1.07
SYCP3-205ENST00000478238 TMEM67Q5HYA8 995 aa8.34□□□□□ -1.07
SYCP3-205ENST00000478238 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
SYCP3-205ENST00000478238 Q96M66 194 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms