RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 BNC2Q6ZN30 1099 aaPredicted RBP7.7□□□□□ -1.18
VPS50-214ENST00000477935 HS2ST1Q7LGA3 356 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 Q8N3U1 123 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 WNT10AQ9GZT5 417 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 COPRSQ9NQ92 184 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 LEMD3Q9Y2U8 911 aa7.7□□□□□ -1.18
VPS50-214ENST00000477935 TEX14Q8IWB6 1497 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 GLI2P10070 1586 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 MED26O95402 600 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 FAM87AP0C7U9 286 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 HOXA10P31260 410 aaPredicted RBP7.69□□□□□ -1.18
VPS50-214ENST00000477935 ETF1P62495 437 aaKnown RBP7.69□□□□□ -1.18
VPS50-214ENST00000477935 RPL6Q02878 288 aaKnown RBP7.69□□□□□ -1.18
VPS50-214ENST00000477935 DUSP27Q5VZP5 1158 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 GATAD2BQ8WXI9 593 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 FBRSQ9HAH7 460 aa7.69□□□□□ -1.18
VPS50-214ENST00000477935 ABCA5Q8WWZ7 1642 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 FAM221AA4D161 298 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 HYAL3O43820 417 aaPredicted RBP7.68□□□□□ -1.18
VPS50-214ENST00000477935 CILPO75339 1184 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 F13A1P00488 732 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 VAMP1P23763 118 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 FAM160A1Q05DH4 1040 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 INTS5Q6P9B9 1019 aaKnown RBP7.68□□□□□ -1.18
VPS50-214ENST00000477935 ZNF507Q8TCN5 953 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 DUSP23Q9BVJ7 150 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 ZFP64Q9NPA5 681 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 GGT7Q9UJ14 662 aa7.68□□□□□ -1.18
VPS50-214ENST00000477935 ADCY10Q96PN6 1610 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 KIAA1324LA8MWY0 1029 aaPredicted RBP7.67□□□□□ -1.18
VPS50-214ENST00000477935 CYP26A1O43174 497 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 RECKO95980 971 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 FOSL1P15407 271 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 GRK4P32298 578 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 CYP27C1Q4G0S4 372 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 DIEXFQ68CQ4 756 aaKnown RBP7.67□□□□□ -1.18
VPS50-214ENST00000477935 GOLM1Q8NBJ4 401 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 PCMTD2Q9NV79 361 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
VPS50-214ENST00000477935 LEFTY1O75610 366 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 BPNT1O95861 308 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 GARTP22102 1010 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 NKG7Q16617 165 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 FBXL19Q6PCT2 694 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 TOP6BLQ8N6T0 577 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 MRRFQ96E11 262 aaKnown RBP7.66□□□□□ -1.18
VPS50-214ENST00000477935 LRRC4CQ9HCJ2 640 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 PTPRGP23470 1445 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
VPS50-214ENST00000477935 ASXL2Q76L83 1435 aa7.66□□□□□ -1.18
VPS50-214ENST00000477935 ZNF76P36508 570 aa7.65□□□□□ -1.18
VPS50-214ENST00000477935 EIF4A3P38919 411 aaKnown RBP7.65□□□□□ -1.18
VPS50-214ENST00000477935 FANCCQ00597 558 aa7.65□□□□□ -1.18
VPS50-214ENST00000477935 SLBPQ14493 270 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS50-214ENST00000477935 ARMCX6Q7L4S7 300 aa7.65□□□□□ -1.18
VPS50-214ENST00000477935 HID1Q8IV36 788 aa7.65□□□□□ -1.18
VPS50-214ENST00000477935 PRDM10Q9NQV6 1147 aa7.65□□□□□ -1.18
VPS50-214ENST00000477935 KCNQ5Q9NR82 932 aa7.65□□□□□ -1.18
VPS50-214ENST00000477935 METTL5Q9NRN9 209 aaKnown RBP7.65□□□□□ -1.18
VPS50-214ENST00000477935 UNCXA6NJT0 531 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 LRIG2O94898 1065 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 PGRP06401 933 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 CAP2P40123 477 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 PDE4BQ07343 736 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 MSMPQ1L6U9 139 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 FAM196AQ6ZSG2 479 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 DTX1Q86Y01 620 aa7.64□□□□□ -1.19
VPS50-214ENST00000477935 KIAA1522Q9P206 1035 aaPredicted RBP7.64□□□□□ -1.19
VPS50-214ENST00000477935 SUPT16HQ9Y5B9 1047 aaKnown RBP7.64□□□□□ -1.19
VPS50-214ENST00000477935 ERICH3Q5RHP9 1530 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 ABCC2Q92887 1545 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 SPINK2P20155 84 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 MPP2Q14168 576 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 FOXQ1Q9C009 403 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 ZC3H7BQ9UGR2 993 aaKnown RBP7.63□□□□□ -1.19
VPS50-214ENST00000477935 ADAMTS1Q9UHI8 967 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 CORINQ9Y5Q5 1042 aa7.63□□□□□ -1.19
VPS50-214ENST00000477935 PTPRMP28827 1452 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 SCAMP3O14828 347 aaKnown RBP7.62□□□□□ -1.19
VPS50-214ENST00000477935 GREM1O60565 184 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 REC114Q7Z4M0 266 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
VPS50-214ENST00000477935 MFSD2AQ8NA29 543 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 ZNF296Q8WUU4 475 aaPredicted RBP7.62□□□□□ -1.19
VPS50-214ENST00000477935 TJP2Q9UDY2 1190 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 ADAM30Q9UKF2 790 aa7.62□□□□□ -1.19
VPS50-214ENST00000477935 TLR3O15455 904 aaKnown RBP7.61□□□□□ -1.19
VPS50-214ENST00000477935 GRIN3BO60391 1043 aa7.61□□□□□ -1.19
VPS50-214ENST00000477935 EOMESO95936 686 aa7.61□□□□□ -1.19
VPS50-214ENST00000477935 PRAMEF13Q5VWM6 474 aa7.61□□□□□ -1.19
VPS50-214ENST00000477935 RNF34Q969K3 372 aa7.61□□□□□ -1.19
VPS50-214ENST00000477935 ACSF2Q96CM8 615 aaPredicted RBP7.61□□□□□ -1.19
VPS50-214ENST00000477935 TMEM87BQ96K49 555 aa7.61□□□□□ -1.19
VPS50-214ENST00000477935 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms