RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TBC1D12O60347 775 aa18.2■□□□□ 0.5
SEC13-215ENST00000477547 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
SEC13-215ENST00000477547 TBC1D10CQ8IV04 446 aa18.2■□□□□ 0.5
SEC13-215ENST00000477547 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
SEC13-215ENST00000477547 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
SEC13-215ENST00000477547 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
SEC13-215ENST00000477547 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
SEC13-215ENST00000477547 FAM155AB1AL88 458 aaPredicted RBP18.19■□□□□ 0.5
SEC13-215ENST00000477547 SHMT1P34896 483 aa18.19■□□□□ 0.5
SEC13-215ENST00000477547 IREB2P48200 963 aaKnown RBP18.19■□□□□ 0.5
SEC13-215ENST00000477547 FKBP1BP68106 108 aa18.19■□□□□ 0.5
SEC13-215ENST00000477547 MOB2Q70IA6 237 aa18.19■□□□□ 0.5
SEC13-215ENST00000477547 ARMC9Q7Z3E5 817 aa18.19■□□□□ 0.5
SEC13-215ENST00000477547 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
SEC13-215ENST00000477547 CYP21A2P08686 494 aa18.18■□□□□ 0.5
SEC13-215ENST00000477547 PDE4BQ07343 736 aa18.18■□□□□ 0.5
SEC13-215ENST00000477547 C2orf69Q8N8R5 385 aa18.18■□□□□ 0.5
SEC13-215ENST00000477547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
SEC13-215ENST00000477547 SLC27A2O14975 620 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 EPB41L2O43491 1005 aaKnown RBP18.17■□□□□ 0.5
SEC13-215ENST00000477547 USP2O75604 605 aaPredicted RBP18.17■□□□□ 0.5
SEC13-215ENST00000477547 PRDM1O75626 825 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 TRPA1O75762 1119 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 CDK8P49336 464 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 KIF23Q02241 960 aaPredicted RBP18.17■□□□□ 0.5
SEC13-215ENST00000477547 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
SEC13-215ENST00000477547 RNF20Q5VTR2 975 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 STAG1Q8WVM7 1258 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 ZNF287Q9HBT7 754 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEC13-215ENST00000477547 NEDD4P46934 1319 aa18.17■□□□□ 0.5
SEC13-215ENST00000477547 GDF11O95390 407 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 SEC24BO95487 1268 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 INPP5BP32019 993 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 AKNAD1Q5T1N1 836 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 RGMBQ6NW40 437 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 TATDN1Q6P1N9 297 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 RNF41Q9H4P4 317 aaPredicted RBP18.16■□□□□ 0.5
SEC13-215ENST00000477547 MKNK2Q9HBH9 465 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 TOMM22Q9NS69 142 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 RNF186Q9NXI6 227 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 CSADQ9Y600 493 aa18.16■□□□□ 0.5
SEC13-215ENST00000477547 PHF20L1A8MW92 1017 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
SEC13-215ENST00000477547 RASA1P20936 1047 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 MCCP23508 829 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 VGLL4Q14135 290 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 RRP12Q5JTH9 1297 aaKnown RBP18.15■□□□□ 0.5
SEC13-215ENST00000477547 MFSD6Q6ZSS7 791 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 ANKRD13AQ8IZ07 590 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 SAGE1Q9NXZ1 904 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
SEC13-215ENST00000477547 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 UBE2Q2LH0YL09 131 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 ORC4O43929 436 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 HSPA4P34932 840 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 RRP1BQ14684 758 aaKnown RBP18.14■□□□□ 0.49
SEC13-215ENST00000477547 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
SEC13-215ENST00000477547 SCYL3Q8IZE3 742 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 USP26Q9BXU7 913 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 ZBTB21Q9ULJ3 1066 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 TACC3Q9Y6A5 838 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 LOC285556D6RIA3 1793 aa18.14■□□□□ 0.49
SEC13-215ENST00000477547 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 CTNND1O60716 968 aaKnown RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 AKR1B1P15121 316 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 CAP2P40123 477 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 ZNF157P51786 506 aaPredicted RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 MAP3K9P80192 1104 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 ABCB5Q2M3G0 1257 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 SHROOM1Q2M3G4 852 aaPredicted RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 STOX1Q6ZVD7 989 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 ZKSCAN4Q969J2 545 aaPredicted RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 CLMNQ96JQ2 1002 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 INCENPQ9NQS7 918 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.13■□□□□ 0.49
SEC13-215ENST00000477547 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
SEC13-215ENST00000477547 E7EWF7 191 aa18.12■□□□□ 0.49
SEC13-215ENST00000477547 GH2P01242 217 aa18.12■□□□□ 0.49
SEC13-215ENST00000477547 LDLRAD1Q5T700 205 aa18.12■□□□□ 0.49
SEC13-215ENST00000477547 RALYLQ86SE5 291 aaKnown RBP18.12■□□□□ 0.49
SEC13-215ENST00000477547 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
SEC13-215ENST00000477547 UPF2Q9HAU5 1272 aaKnown RBP18.12■□□□□ 0.49
SEC13-215ENST00000477547 PICK1Q9NRD5 415 aa18.12■□□□□ 0.49
SEC13-215ENST00000477547 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.12■□□□□ 0.49
SEC13-215ENST00000477547 TSPY2A6NKD2 308 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 B4E1Z4 1266 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 RANBP6O60518 1105 aaKnown RBP18.11■□□□□ 0.49
SEC13-215ENST00000477547 ASNSP08243 561 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 FGRP09769 529 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 TRDNQ13061 729 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms