RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 HERC5Q9UII4 1024 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-206ENST00000477485 BAG3O95817 575 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 ASNSP08243 561 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 GNAI3P08754 354 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 CNGA1P29973 690 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 CCND3P30281 292 aaPredicted RBP8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 BMP8BP34820 402 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 BACE1P56817 501 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 HERVK_113P62684 666 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 G3BP1Q13283 466 aaKnown RBP eCLIP8.21□□□□□ -1.15e-10■■□□□ 13.8
RTFDC1-206ENST00000477485 RRP1BQ14684 758 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 TTC39AQ5SRH9 613 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 NAA16Q6N069 864 aaPredicted RBP8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 ZNF384Q8TF68 577 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 TGFBRAP1Q8WUH2 860 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 SOCS4Q8WXH5 440 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 FAM161BQ96MY7 647 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 P2RX7Q99572 595 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 PI4KBQ9UBF8 816 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 SAP30BPQ9UHR5 308 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 GJD2Q9UKL4 321 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 NDUFB9Q9Y6M9 179 aa8.21□□□□□ -1.1
RTFDC1-206ENST00000477485 LTBP2Q14767 1821 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 UQCRFS1P1P0C7P4 283 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 MAPK4P31152 587 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 RGS2P41220 211 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 MCAMP43121 646 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 ERVK-24P63145 666 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 CACNB2Q08289 660 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 CCL14Q16627 93 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 SHROOM1Q2M3G4 852 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 GPR142Q7Z601 462 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 LBHD1Q9BQE6 289 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 DHX36Q9H2U1 1008 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 TXNRD2Q9NNW7 524 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 MORF4L1Q9UBU8 362 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 OGDHLQ9ULD0 1010 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 PALD1Q9ULE6 856 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 PFASO15067 1338 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 FLT1P17948 1338 aa8.2□□□□□ -1.1
RTFDC1-206ENST00000477485 C19orf81C9J6K1 198 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 GLRX3O76003 335 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 MAP4K4O95819 1239 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 PLCG2P16885 1265 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 ATN1P54259 1190 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 RAB3GAP1Q15042 981 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 LRRC26Q2I0M4 334 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 LRIT3Q3SXY7 679 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 CCDC158Q5M9N0 1113 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 FRAT1Q92837 279 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 APBA2Q99767 749 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 WDR18Q9BV38 432 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 SENP6Q9GZR1 1112 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 PORCNQ9H237 461 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 ZBTB21Q9ULJ3 1066 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 STXBP5LQ9Y2K9 1186 aa8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 ZNFX1Q9P2E3 1918 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-206ENST00000477485 COL6A3P12111 3177 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 COL11A1P12107 1806 aaPredicted RBP8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 PLXNA1Q9UIW2 1896 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 GNAI2P04899 355 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 HOXA7P31268 230 aaPredicted RBP8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 USP5P45974 858 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 DYNLL1P63167 89 aaKnown RBP8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 Q3C1V9 767 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 MFSD14CQ5VZR4 134 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 GPR153Q6NV75 609 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 ATF7IPQ6VMQ6 1270 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 CLUAP1Q96AJ1 413 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 MTMR10Q9NXD2 777 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 IVNS1ABPQ9Y6Y0 642 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 RLFQ13129 1914 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 CUL9Q8IWT3 2517 aa8.18□□□□□ -1.1
RTFDC1-206ENST00000477485 PNMA6EA0A0J9YXQ4 647 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 GH2P01242 217 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 CT47B1P0C2W7 299 aaPredicted RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 XRCC5P13010 732 aaKnown RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 CYP7A1P22680 504 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 CCNA1P78396 465 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 JAG1P78504 1218 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 MAP2K5Q13163 448 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 SAMD1Q6SPF0 538 aaPredicted RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 ADGRA1Q86SQ6 560 aa8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
RTFDC1-206ENST00000477485 MIGA1Q8NAN2 632 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms