RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 TAOK2Q9UL54 1235 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 ZBTB21Q9ULJ3 1066 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-236ENST00000477477 C19orf81C9J6K1 198 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 HOXA7P31268 230 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-236ENST00000477477 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDLBP-236ENST00000477477 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
HDLBP-236ENST00000477477 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-236ENST00000477477 AACSQ86V21 672 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 MAGEB6Q8N7X4 407 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 DPF3Q92784 378 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 HTATIP2Q9BUP3 242 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 ANTXR1Q9H6X2 564 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 PAK6Q9NQU5 681 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-236ENST00000477477 NDUFB9Q9Y6M9 179 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 CEP290O15078 2479 aa13.86□□□□□ -0.19
HDLBP-236ENST00000477477 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
HDLBP-236ENST00000477477 CAPN2P17655 700 aa13.85□□□□□ -0.19
HDLBP-236ENST00000477477 USP5P45974 858 aa13.85□□□□□ -0.19
HDLBP-236ENST00000477477 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
HDLBP-236ENST00000477477 DEFB118Q96PH6 123 aa13.85□□□□□ -0.19
HDLBP-236ENST00000477477 HMGCRP04035 888 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 HERVK_113P62684 666 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 HSP90AB4PQ58FF6 505 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
HDLBP-236ENST00000477477 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 EHD4Q9H223 541 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 GJD2Q9UKL4 321 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 CDK5RAP2Q96SN8 1893 aa13.84□□□□□ -0.19
HDLBP-236ENST00000477477 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
HDLBP-236ENST00000477477 GH2P01242 217 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 TFRCP02786 760 aaKnown RBP13.83□□□□□ -0.2
HDLBP-236ENST00000477477 TATDN1Q6P1N9 297 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDLBP-236ENST00000477477 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 SERPINB13Q9UIV8 391 aa13.83□□□□□ -0.2
HDLBP-236ENST00000477477 PEX10O60683 326 aa13.82□□□□□ -0.2
HDLBP-236ENST00000477477 MS4A1P11836 297 aa13.82□□□□□ -0.2
HDLBP-236ENST00000477477 TTF1Q15361 905 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L2Q6R6M4 530 aa13.82□□□□□ -0.2
HDLBP-236ENST00000477477 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
HDLBP-236ENST00000477477 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
HDLBP-236ENST00000477477 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-236ENST00000477477 C12orf42Q96LP6 360 aa13.82□□□□□ -0.2
HDLBP-236ENST00000477477 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
HDLBP-236ENST00000477477 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 ERVK-24P63145 666 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 TRIM32Q13049 653 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 CLASRPQ8N2M8 674 aaKnown RBP13.81□□□□□ -0.2
HDLBP-236ENST00000477477 SOCS4Q8WXH5 440 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 TRIB2Q92519 343 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 FEZ1Q99689 392 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 TRIOBPQ9H2D6 2365 aa13.81□□□□□ -0.2
HDLBP-236ENST00000477477 RANBP2P49792 3224 aaKnown RBP13.8□□□□□ -0.2
HDLBP-236ENST00000477477 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 PDE6AP16499 860 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 MAPK4P31152 587 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 PLCD1P51178 756 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-236ENST00000477477 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-236ENST00000477477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDLBP-236ENST00000477477 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 HMX1Q9NP08 348 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-236ENST00000477477 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
HDLBP-236ENST00000477477 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
HDLBP-236ENST00000477477 DDX60LQ5H9U9 1706 aaKnown RBP13.79□□□□□ -0.2
HDLBP-236ENST00000477477 APBB1O00213 710 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 HMMRO75330 724 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
HDLBP-236ENST00000477477 CYP2B6P20813 491 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 SHMT1P34896 483 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 GABPAQ06546 454 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
HDLBP-236ENST00000477477 ABCB5Q2M3G0 1257 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 Q3C1V9 767 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 SLC9C2Q5TAH2 1124 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 ANKLE1Q8NAG6 615 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 DIS3LQ8TF46 1054 aaKnown RBP13.79□□□□□ -0.2
HDLBP-236ENST00000477477 PAWRQ96IZ0 340 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms