RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 STRIP1Q5VSL9 837 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 CDC42EP5Q6NZY7 148 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 ILDR1Q86SU0 546 aaPredicted RBP7.71□□□□□ -1.17
CCDC30-209ENST00000477155 TRIM22Q8IYM9 498 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 TMEM87AQ8NBN3 555 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 CCDC196A0A1B0GTZ2 297 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 PSDA5PKW4 1024 aaPredicted RBP7.71□□□□□ -1.18
CCDC30-209ENST00000477155 KIF28PB7ZC32 967 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 PLEKHA8P1O95397 391 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 IFNAR1P17181 557 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 KIAA2012Q0VF49 1180 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 TROAPQ12815 778 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 NFIAQ12857 509 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 TRIM29Q14134 588 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 DACT2Q5SW24 774 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 APOBEC3HQ6NTF7 200 aaKnown RBP7.71□□□□□ -1.18
CCDC30-209ENST00000477155 CRACR2BQ8N4Y2 399 aaPredicted RBP7.71□□□□□ -1.18
CCDC30-209ENST00000477155 MTA3Q9BTC8 594 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 CFAP45Q9UL16 551 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 KCNJ14Q9UNX9 436 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 SUGT1Q9Y2Z0 365 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 V9GY48 417 aaPredicted RBP7.71□□□□□ -1.18
CCDC30-209ENST00000477155 LTBP1Q14766 1721 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 RGPD3A6NKT7 1758 aaPredicted RBP7.71□□□□□ -1.18
CCDC30-209ENST00000477155 RGPD4Q7Z3J3 1758 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 YDJCA8MPS7 323 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 IGSF3O75054 1194 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 WDHD1O75717 1129 aaPredicted RBP7.71□□□□□ -1.18
CCDC30-209ENST00000477155 RCSD1Q6JBY9 416 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 ZFPM1Q8IX07 1006 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 LARGE2Q8N3Y3 721 aa7.71□□□□□ -1.18
CCDC30-209ENST00000477155 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 XRCC6P12956 609 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 RASA1P20936 1047 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 AKAP17AQ02040 695 aaKnown RBP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 CCDC93Q567U6 631 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 CC2D2BQ6DHV5 1058 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 CERS3Q8IU89 383 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 KAT14Q9H8E8 782 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 TIAM2Q8IVF5 1701 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 FSD2A1L4K1 749 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 POLD1P28340 1107 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 NBPF11Q86T75 865 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 CTCFLQ8NI51 663 aaPredicted RBP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 BICD2Q8TD16 824 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 PGBD1Q96JS3 809 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 PANK2Q9BZ23 570 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 ZBTB12Q9Y330 459 aaPredicted RBP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 LIG1P18858 919 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 KIF23Q02241 960 aaPredicted RBP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 CAMK4Q16566 473 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 HHIPL2Q6UWX4 724 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 ZSCAN29Q8IWY8 852 aaPredicted RBP7.7□□□□□ -1.18
CCDC30-209ENST00000477155 SUPT20HQ8NEM7 779 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 GRPEL1Q9HAV7 217 aa7.7□□□□□ -1.18
CCDC30-209ENST00000477155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
CCDC30-209ENST00000477155 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 BTBD18B2RXH4 712 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 EIF6P56537 245 aaKnown RBP7.69□□□□□ -1.18
CCDC30-209ENST00000477155 C16orf86Q6ZW13 317 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 CCDC125Q86Z20 511 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 RTKN2Q8IZC4 609 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 PNMA1Q8ND90 353 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 SYAP1Q96A49 352 aaPredicted RBP7.69□□□□□ -1.18
CCDC30-209ENST00000477155 ZNF396Q96N95 335 aaPredicted RBP7.69□□□□□ -1.18
CCDC30-209ENST00000477155 TDRD3Q9H7E2 651 aaKnown RBP7.69□□□□□ -1.18
CCDC30-209ENST00000477155 ZNF287Q9HBT7 754 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 PIM2Q9P1W9 311 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 CLIC4Q9Y696 253 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 ATP2B1P20020 1258 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 ME1P48163 572 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 RASGRP2Q7LDG7 609 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 CLEC10AQ8IUN9 316 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 STAG2Q8N3U4 1231 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 SRBD1Q8N5C6 995 aaKnown RBP7.69□□□□□ -1.18
CCDC30-209ENST00000477155 VPS54Q9P1Q0 977 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 MAST2Q6P0Q8 1798 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 SCN9AQ15858 1988 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 C10orf71Q711Q0 1435 aa7.69□□□□□ -1.18
CCDC30-209ENST00000477155 DEXIO95424 95 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 GOLGA8HP0CJ92 632 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 VEGFAP15692 232 aaPredicted RBP7.68□□□□□ -1.18
CCDC30-209ENST00000477155 SF3A1Q15459 793 aaKnown RBP7.68□□□□□ -1.18
CCDC30-209ENST00000477155 L1TD1Q5T7N2 865 aaKnown RBP7.68□□□□□ -1.18
CCDC30-209ENST00000477155 MYSM1Q5VVJ2 828 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 TMEM47Q9BQJ4 181 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 CALM1P0DP23 149 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 CALM2P0DP24 149 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 CALM3P0DP25 149 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 ZNF445P59923 1031 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 STK38Q15208 465 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 DGKHQ86XP1 1220 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 RNF214Q8ND24 703 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 WASF1Q92558 559 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 CEP95Q96GE4 821 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 PRMT6Q96LA8 375 aaPredicted RBP7.68□□□□□ -1.18
CCDC30-209ENST00000477155 ZDHHC15Q96MV8 337 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 MTFR1LQ9H019 292 aa7.68□□□□□ -1.18
CCDC30-209ENST00000477155 OSBPL5Q9H0X9 879 aaPredicted RBP7.68□□□□□ -1.18
CCDC30-209ENST00000477155 CPVLQ9H3G5 476 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms